Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0129 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.7e-77 290.0 143 100.0
TWI39G0933 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-37 159.8 142 59.2
TWI23G1128 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.5e-34 148.7 133 58.6
TWI09G1598 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.1e-31 139.4 92 70.7
RcHm_v2.0_Chr5g0038141 Rosa chinensis HOM05D000047 ORTHO05D000044 6.2e-23 111.3 141 39.0
Rhsim07G0159100 Rhododendron simsii HOM05D000045 ORTHO05D009425 6.8e-22 107.8 145 42.1
RcHm_v2.0_Chr7g0239101 Rosa chinensis HOM05D000047 ORTHO05D000044 1.5e-21 106.7 91 52.7
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 9.8e-21 104.0 156 41.0
TWI15G0996 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-20 103.6 140 40.0
TWI56G1467 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.7e-17 93.2 102 52.9
TWI38G2215 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.0e-17 92.4 133 39.8
TWI60G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.2e-15 84.7 82 48.8
TWI75G0659 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.1e-14 82.4 128 37.5
TWI59G1176 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.6e-13 79.3 86 45.3
TWI39G1063 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-12 77.0 140 34.3
FvH4_6g45122 Fragaria vesca HOM05D000047 ORTHO05D000044 2.9e-12 75.9 138 34.1
RcHm_v2.0_Chr2g0102771 Rosa chinensis HOM05D000047 ORTHO05D000044 1.1e-11 73.9 61 52.5
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-11 73.6 141 31.2
Rhsim01G0158600 Rhododendron simsii HOM05D012502 ORTHO05D000044 1.4e-11 73.6 69 49.3
TWI39G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.4e-11 71.6 118 37.3
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 7.1e-11 71.2 139 30.9
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-11 71.2 141 31.2
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-11 71.2 141 31.2
TWI23G0490 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.2e-11 70.9 120 37.5
Nn1g09953 Nelumbo nucifera HOM05D000047 ORTHO05D000044 1.2e-10 70.5 85 41.2
Nn1g10164 Nelumbo nucifera HOM05D000047 ORTHO05D000044 1.2e-10 70.5 85 41.2
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 1.6e-10 70.1 141 30.5
QL02p080185 Quercus lobata HOM05D000047 ORTHO05D000044 1.6e-10 70.1 141 30.5
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 1.6e-10 70.1 141 30.5
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 1.6e-10 70.1 141 30.5
Rhsim11G0143600 Rhododendron simsii HOM05D000995 ORTHO05D000044 2.1e-10 69.7 104 43.3
AUR62027595 Chenopodium quinoa HOM05D000047 ORTHO05D000044 6.0e-10 68.2 141 28.4
Sopen08g013820 Solanum pennellii HOM05D000047 ORTHO05D000044 7.8e-10 67.8 125 35.2
FvH4_7g03662 Fragaria vesca HOM05D000047 ORTHO05D000044 1.0e-09 67.4 140 30.0
Medtr0002s0960 Medicago truncatula HOM05D005194 ORTHO05D000044 1.3e-09 67.0 72 50.0
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 1.3e-09 67.0 141 29.8
ECA236G4151 Erigeron canadensis HOM05D000006 ORTHO05D000044 1.7e-09 66.6 146 32.9
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-09 66.2 115 35.7
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-09 66.2 143 27.3
FvH4_4g05272 Fragaria vesca HOM05D000047 ORTHO05D000044 3.0e-09 65.9 81 39.5
Rhsim04G0187600 Rhododendron simsii HOM05D000047 ORTHO05D000044 3.0e-09 65.9 135 30.4
Sopen01g029240 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-09 65.5 143 27.3
Sopen09g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-09 65.5 164 28.7
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-09 65.5 143 27.3
Oeu050121.1 Olea europaea HOM05D000047 ORTHO05D000044 5.1e-09 65.1 143 28.0
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-09 65.1 164 28.7
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 5.1e-09 65.1 143 26.6
Sopen06g006560 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-09 65.1 140 29.3
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-09 65.1 164 28.7
FvH4_3g31361 Fragaria vesca HOM05D000047 ORTHO05D000044 6.6e-09 64.7 139 30.2
Sopen12g017170 Solanum pennellii HOM05D000047 ORTHO05D000044 6.6e-09 64.7 166 28.3
Sopen00g006390 Solanum pennellii HOM05D000047 ORTHO05D000044 8.6e-09 64.3 164 28.0
Sopen01g028490 Solanum pennellii HOM05D000047 ORTHO05D000044 8.6e-09 64.3 139 28.1
Sopen00g012580 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 164 28.7
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 143 26.6
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 143 26.6
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-08 63.9 143 26.6
Sopen07g022030 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 164 28.0
Sopen09g008970 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 143 26.6
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 143 26.6
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-08 63.9 143 26.6
TWI53G1469 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 140 28.6
TWI81G0361 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 140 28.6
CAN.G375.43 Capsicum annuum HOM05D000043 ORTHO05D000044 1.5e-08 63.5 164 27.4
Sabra01G0113900 Salix brachista HOM05D000047 ORTHO05D000044 1.5e-08 63.5 141 27.0
Sopen04g021430 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.5 143 25.9
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-08 63.5 138 29.7
Hma1.2p1_0161F.1_g071400 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.9e-08 63.2 92 34.8
Hma1.2p1_0321F.1_g124153 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.9e-08 63.2 92 34.8
Hma1.2p1_0900F.1_g234540 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.9e-08 63.2 92 34.8
Hma1.2p1_2553F.1_g324343 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.9e-08 63.2 92 34.8
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-08 63.2 143 26.6
CAN.G502.8 Capsicum annuum HOM05D000047 ORTHO05D000044 2.5e-08 62.8 164 26.8
Sopen02g008370 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-08 62.8 143 26.6
CSS0018256 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.3e-08 62.0 130 33.1
CAN.G866.30 Capsicum annuum HOM05D000047 ORTHO05D000044 4.3e-08 62.0 145 32.4
ECA247G0597 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.3e-08 62.0 146 30.8
Nn1g07149 Nelumbo nucifera HOM05D000047 ORTHO05D000044 4.3e-08 62.0 91 38.5
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-08 62.0 138 29.0
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-08 62.0 143 25.2
TWI15G0028 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.3e-08 62.0 140 30.7
CAN.G1077.25 Capsicum annuum HOM05D000047 ORTHO05D000044 5.6e-08 61.6 164 26.8
AUR62006516 Chenopodium quinoa HOM05D000047 ORTHO05D000044 5.6e-08 61.6 137 27.0
Hma1.2p1_0446F.1_g154710 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 5.6e-08 61.6 137 27.0
Sopen01g019880 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-08 61.6 164 28.0
Sopen01g028690 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-08 61.6 140 26.4
CAN.G672.5 Capsicum annuum HOM05D000047 ORTHO05D000044 7.3e-08 61.2 164 27.4
ECA234G0074 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.3e-08 61.2 132 32.6
ECA247G1395 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.3e-08 61.2 132 33.3
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 7.3e-08 61.2 143 25.9
TWI23G0626 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 7.3e-08 61.2 136 33.8
TWI73G0191 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 7.3e-08 61.2 140 30.7
CAN.G337.73 Capsicum annuum HOM05D000047 ORTHO05D000044 9.5e-08 60.8 162 27.2
ECA232G0937 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.5e-08 60.8 121 33.9
ECA247G2808 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.5e-08 60.8 121 33.9
FvH4_6g13113 Fragaria vesca HOM05D000047 ORTHO05D000044 9.5e-08 60.8 137 28.5
Hma1.2p1_0900F.1_g234543 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 9.5e-08 60.8 92 33.7
Rhsim07G0168500 Rhododendron simsii HOM05D000047 ORTHO05D000044 9.5e-08 60.8 106 31.1
Sopen05g018910 Solanum pennellii HOM05D000047 ORTHO05D000044 9.5e-08 60.8 138 29.0
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.5e-08 60.8 143 28.0
Sopen09g023240 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-07 60.5 143 25.9
TWI59G1343 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.2e-07 60.5 140 30.0
TWI60G0654 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.2e-07 60.5 140 30.0
TWI60G1316 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.2e-07 60.5 140 30.0
TWI81G0819 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.2e-07 60.5 130 34.6
ECA233G2262 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.6e-07 60.1 146 30.8
ECA238G1593 Erigeron canadensis HOM05D000006 ORTHO05D000044 2.1e-07 59.7 108 38.0
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 2.1e-07 59.7 134 32.8
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 2.1e-07 59.7 134 32.8
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 2.1e-07 59.7 134 32.8
Sopen03g012840 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-07 59.7 143 25.9
Sopen05g009200 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-07 59.7 164 27.4
Sopen11g018660 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-07 59.7 138 28.3
TWI23G1111 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.1e-07 59.7 140 29.3
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-07 59.3 118 28.8
TWI34G1932 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.8e-07 59.3 140 29.3
ECA246G0118 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.6e-07 58.9 147 30.6
PSO170G1747 Papaver somniferum HOM05D000047 ORTHO05D000044 3.6e-07 58.9 141 31.9
SGA_v2.0_scaffold72G24057 Striga asiatica HOM05D000047 ORTHO05D000044 3.6e-07 58.9 132 31.8
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-07 58.5 138 26.8
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-07 58.5 117 31.6
CAN.G1054.4 Capsicum annuum HOM05D000047 ORTHO05D000044 6.2e-07 58.2 164 26.2
ECA232G4059 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.2e-07 58.2 146 30.8
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 6.2e-07 58.2 138 28.3
Sopen08g016380 Solanum pennellii HOM05D000047 ORTHO05D000044 6.2e-07 58.2 143 25.2
CSS0039284 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.1e-07 57.8 107 32.7
AUR62014025 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.1e-07 57.8 89 34.8
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 8.1e-07 57.8 131 32.8
Sabra10G0009400 Salix brachista HOM05D000047 ORTHO05D006662 8.1e-07 57.8 93 31.2
ECA236G2778 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-06 57.4 132 31.8
ECA236G4957 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-06 57.4 109 37.6
PSO210G1642 Papaver somniferum HOM05D000047 ORTHO05D000044 1.1e-06 57.4 141 30.5
Sabra16G0088400 Salix brachista HOM05D000047 ORTHO05D000044 1.1e-06 57.4 103 30.1
Sopen05g025520 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.4 117 31.6
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.4 148 25.0
Sopen11g014820 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.4 117 31.6
CAN.G504.10 Capsicum annuum HOM05D000047 ORTHO05D000044 1.4e-06 57.0 138 26.8
Rhsim10G0182100 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 99 35.4
Sopen03g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 117 30.8
Sopen09g024040 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 135 27.4
Sopen10g007050 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 136 27.9
TWI60G0143 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.4e-06 57.0 140 29.3
CSS0024582 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.8e-06 56.6 108 38.0
CANSAT54G0884 Cannabis sativa HOM05D000047 ORTHO05D000044 1.8e-06 56.6 136 27.2
ECA236G0720 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.8e-06 56.6 146 30.1
ECA246G4401 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.8e-06 56.6 132 31.1
QL08p037947 Quercus lobata HOM05D000047 ORTHO05D000044 1.8e-06 56.6 131 32.1
Sabra02G0068300 Salix brachista HOM05D000047 ORTHO05D006662 1.8e-06 56.6 93 31.2
Sabra11G0100000 Salix brachista HOM05D000047 ORTHO05D000044 1.8e-06 56.6 93 31.2
Sabra17G0102700 Salix brachista HOM05D000047 ORTHO05D000044 1.8e-06 56.6 93 31.2
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 56.6 143 25.9
Sopen06g014690 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 56.6 158 24.1
Medtr7g066620 Medicago truncatula HOM05D000311 ORTHO05D000183 2.4e-06 56.2 110 30.9
Sabra05G0005800 Salix brachista HOM05D000047 ORTHO05D000044 2.4e-06 56.2 82 32.9
Sabra06G0040900 Salix brachista HOM05D000047 ORTHO05D000044 2.4e-06 56.2 82 32.9
Sabra15G0033900 Salix brachista HOM05D000047 ORTHO05D006662 2.4e-06 56.2 82 32.9
Sabra16G0019500 Salix brachista HOM05D000047 ORTHO05D006662 2.4e-06 56.2 82 32.9
Sabra17G0000400 Salix brachista HOM05D000047 ORTHO05D006662 2.4e-06 56.2 82 32.9
Sabra17G0115700 Salix brachista HOM05D000047 ORTHO05D000044 2.4e-06 56.2 82 32.9
Sopen06g009440 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 112 29.5
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 143 25.2
Sopen12g016380 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-06 56.2 91 31.9
Sopen12g027530 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 138 29.7
TAR584G0001 Trochodendron aralioides HOM05D000047 ORTHO05D000044 2.4e-06 56.2 91 38.5
CSS0035830 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.1e-06 55.8 107 32.7
CAN.G322.32 Capsicum annuum HOM05D000047 ORTHO05D000044 3.1e-06 55.8 145 29.7
AUR62037975 Chenopodium quinoa HOM05D000047 ORTHO05D000044 3.1e-06 55.8 91 34.1
ECA238G1133 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-06 55.8 147 29.9
ECA246G1095 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-06 55.8 146 29.5
Sabra16G0041600 Salix brachista HOM05D000047 ORTHO05D000044 3.1e-06 55.8 82 32.9
Sopen10g006080 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 55.8 93 30.1
CAN.G2179.2 Capsicum annuum HOM05D000011 ORTHO05D001721 4.0e-06 55.5 114 28.9
Ca_04838_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.0e-06 55.5 137 28.5
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 4.0e-06 55.5 137 28.5
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 4.0e-06 55.5 137 28.5
ECA240G0186 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.0e-06 55.5 146 29.5
Sopen10g015880 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-06 55.5 136 27.2
ECA247G0519 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.2e-06 55.1 146 28.8
Rhsim02G0128300 Rhododendron simsii HOM05D001201 ORTHO05D001100 5.2e-06 55.1 72 37.5
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 5.2e-06 55.1 136 27.9
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 5.2e-06 55.1 91 30.8
Cc02_g08930 Coffea canephora HOM05D000047 ORTHO05D000044 6.8e-06 54.7 134 32.8
PSO063G1527 Papaver somniferum HOM05D000047 ORTHO05D000044 6.8e-06 54.7 141 31.2
Rhsim02G0180000 Rhododendron simsii HOM05D000047 ORTHO05D000044 6.8e-06 54.7 75 37.3
Rhsim12G0034600 Rhododendron simsii HOM05D000047 ORTHO05D000044 6.8e-06 54.7 72 37.5
Sopen08g008700 Solanum pennellii HOM05D000047 ORTHO05D000044 6.8e-06 54.7 152 26.3
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 8.9e-06 54.3 137 27.7
Sabra02G0006300 Salix brachista HOM05D000047 ORTHO05D000044 8.9e-06 54.3 82 31.7
Sabra03G0012800 Salix brachista HOM05D000047 ORTHO05D000044 8.9e-06 54.3 81 32.1


User provided reference genes

Program Settings