Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 2.5e-101 372.1 187 100.0
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 4.1e-43 178.7 158 57.6
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 2.3e-41 172.9 170 58.2
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 2.9e-41 172.6 185 52.4
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 7.2e-40 167.9 177 52.0
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 7.2e-40 167.9 168 56.5
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 1.4e-38 163.7 188 51.1
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 3.0e-38 162.5 176 51.7
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 4.0e-38 162.2 185 51.4
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 5.2e-38 161.8 179 50.8
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 5.2e-38 161.8 187 51.3
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 4.9e-36 155.2 182 48.9
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.8e-35 153.3 181 48.6
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 2.4e-35 152.9 176 48.9
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 1.6e-34 150.2 173 48.6
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.5e-34 149.1 182 48.9
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.5e-34 149.1 171 50.9
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 1.0e-33 147.5 153 49.7
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 5.0e-33 145.2 176 48.3
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 1.9e-32 143.3 179 49.2
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 3.3e-32 142.5 176 47.2
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 3.6e-31 139.0 181 43.1
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 6.2e-31 138.3 164 47.0
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 1.4e-30 137.1 181 46.4
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 2.3e-30 136.3 178 44.4
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 2.3e-30 136.3 157 49.0
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 2.2e-28 129.8 197 40.6
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 4.3e-24 115.5 184 40.8
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 1.2e-23 114.0 171 41.5
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 4.0e-22 109.0 136 46.3
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 1.5e-21 107.1 176 39.2
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 2.0e-21 106.7 148 41.9
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 2.6e-21 106.3 186 39.8
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 9.8e-21 104.4 165 40.0
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 3.7e-20 102.4 179 39.1
Lalb_Chr15g0088411 Lupinus albus HOM05D008403 ORTHO05D010317 2.3e-17 93.2 80 61.2
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 1.1e-16 90.9 178 37.6
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 2.5e-16 89.7 185 35.1
Thecc.06G243800 Theobroma cacao HOM05D014554 ORTHO05D010317 2.5e-16 89.7 151 39.7
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 7.3e-16 88.2 128 39.1
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 9.5e-16 87.8 181 29.8
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 1.2e-15 87.4 180 36.7
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.6e-15 87.0 159 39.0
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 4.7e-15 85.5 160 40.0
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 1.1e-14 84.3 185 35.7
Thecc.05G027500 Theobroma cacao HOM05D014554 ORTHO05D036092 4.0e-14 82.4 186 35.5
Gohir.D06G218900 Gossypium hirsutum HOM05D014554 ORTHO05D010317 6.8e-14 81.6 170 34.1
Gorai.010G247400 Gossypium raimondii HOM05D014554 ORTHO05D010317 6.8e-14 81.6 170 34.1
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 2.0e-13 80.1 153 35.9
Gohir.A06G202800 Gossypium hirsutum HOM05D014554 ORTHO05D010317 2.6e-13 79.7 170 34.1
SGA_v2.0_scaffold186G40151 Striga asiatica HOM05D008403 ORTHO05D010317 7.6e-13 78.2 167 31.1
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 4.9e-12 75.5 140 31.4
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 1.9e-11 73.6 154 31.8
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 4.1e-11 72.4 182 29.7
TAR627G0557 Trochodendron aralioides HOM05D008403 ORTHO05D010317 5.4e-11 72.0 173 29.5
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 1.6e-10 70.5 145 29.7
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 2.1e-10 70.1 93 41.9
Thecc.02G296800 Theobroma cacao HOM05D008403 ORTHO05D010317 4.6e-10 68.9 76 52.6
MBI19_g08236_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D010044 3.0e-09 66.2 171 31.0
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 3.9e-09 65.9 150 29.3
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 8.6e-09 64.7 168 27.4
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 1.1e-08 64.3 141 31.9
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-08 64.3 162 28.4
SGA_v2.0_scaffold47G17718 Striga asiatica HOM05D008403 ORTHO05D010317 3.3e-08 62.8 156 30.1
Atru.chr4.844 Acer truncatum HOM05D004113 ORTHO05D005233 5.6e-08 62.0 176 27.3
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 9.6e-08 61.2 167 28.1
Gorai.001G145900 Gossypium raimondii HOM05D008191 ORTHO05D010044 1.6e-07 60.5 171 28.1
Gohir.A07G130033 Gossypium hirsutum HOM05D008191 ORTHO05D010044 2.8e-07 59.7 144 27.8
MBI19_g26312_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 3.6e-07 59.3 172 30.8
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 4.7e-07 58.9 174 30.5
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 6.2e-07 58.5 143 31.5
Gohir.D07G134300 Gossypium hirsutum HOM05D008191 ORTHO05D010044 1.4e-06 57.4 171 27.5
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 1.4e-06 57.4 136 34.6
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.4e-06 57.4 164 23.2
Haze_04963 Corylus avellana HOM05D003556 ORTHO05D003404 3.1e-06 56.2 169 27.8
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-06 55.8 176 31.8
Lsat_1_v5_gn_4_38540 Lactuca sativa HOM05D001445 ORTHO05D001261 5.2e-06 55.5 154 29.2
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 5.2e-06 55.5 156 28.2
PSO782G0985 Papaver somniferum HOM05D001445 ORTHO05D001261 6.8e-06 55.1 191 31.4


User provided reference genes

Program Settings