Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 6.7e-78 293.9 143 100.0
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 2.8e-76 288.5 143 97.9
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 6.9e-75 283.9 141 96.5
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.2e-74 283.1 141 96.5
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 1.2e-74 283.1 141 95.7
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 1.2e-74 283.1 141 95.7
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 1.5e-74 282.7 141 95.7
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.5e-74 282.7 141 95.7
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 2.6e-74 282.0 140 95.7
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 2.6e-74 282.0 141 95.0
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 3.4e-74 281.6 141 95.7
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 3.4e-74 281.6 141 95.7
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 3.4e-74 281.6 141 95.0
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 3.4e-74 281.6 141 95.7
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 4.5e-74 281.2 141 94.3
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 4.5e-74 281.2 141 95.0
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 4.5e-74 281.2 141 96.5
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 4.5e-74 281.2 141 94.3
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 5.9e-74 280.8 141 95.0
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 7.7e-74 280.4 141 95.0
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 7.7e-74 280.4 141 95.0
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 7.7e-74 280.4 141 95.0
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 1.0e-73 280.0 141 95.0
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 1.0e-73 280.0 141 95.0
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 1.0e-73 280.0 141 95.0
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 1.0e-73 280.0 141 95.0
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 1.3e-73 279.6 141 95.0
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.3e-73 279.6 141 95.0
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 1.3e-73 279.6 141 95.0
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 1.3e-73 279.6 141 93.6
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 1.7e-73 279.3 141 95.0
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.7e-73 279.3 141 95.0
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 1.7e-73 279.3 141 95.0
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 1.7e-73 279.3 141 94.3
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 1.7e-73 279.3 142 94.4
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 1.7e-73 279.3 142 94.4
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.2e-73 278.9 141 94.3
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.2e-73 278.9 141 94.3
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 2.2e-73 278.9 141 94.3
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 2.2e-73 278.9 141 95.7
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 2.9e-73 278.5 141 93.6
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 2.9e-73 278.5 141 94.3
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.9e-73 278.5 141 95.0
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 3.8e-73 278.1 141 95.0
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 3.8e-73 278.1 141 94.3
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 3.8e-73 278.1 141 94.3
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 5.0e-73 277.7 141 93.6
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 8.5e-73 276.9 141 95.0
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 8.5e-73 276.9 139 93.5
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 8.5e-73 276.9 141 94.3
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 1.1e-72 276.6 141 92.9
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 1.4e-72 276.2 139 93.5
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 1.4e-72 276.2 141 92.2
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 1.4e-72 276.2 142 93.7
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 92.9
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 93.6
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 91.5
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 91.5
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 91.5
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 2.5e-72 275.4 141 92.2
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 5.5e-72 274.2 141 93.6
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 5.5e-72 274.2 141 90.8
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 7.2e-72 273.9 141 92.9
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 7.2e-72 273.9 141 92.2
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 7.2e-72 273.9 141 92.2
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.2e-71 273.1 141 90.8
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 1.2e-71 273.1 141 91.5
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.1e-71 272.3 141 90.8
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 3.6e-71 271.6 141 92.2
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 3.0e-70 268.5 138 91.3
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 3.9e-70 268.1 141 91.5
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 8.8e-70 266.9 141 90.8
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 7.4e-69 263.8 138 89.9
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 9.7e-69 263.5 141 88.7
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 1.3e-68 263.1 141 88.7
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 1.3e-68 263.1 141 89.4
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 1.3e-68 263.1 130 95.4
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 1.7e-68 262.7 140 89.3
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 1.7e-68 262.7 138 88.4
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 2.2e-68 262.3 151 86.8
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 2.2e-68 262.3 164 79.9
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 2.2e-68 262.3 138 89.1
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 3.7e-68 261.5 140 89.3
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 6.3e-68 260.8 140 87.9
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 6.3e-68 260.8 137 91.2
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 8.2e-68 260.4 140 88.6
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 8.2e-68 260.4 140 87.9
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 8.2e-68 260.4 140 87.9
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 1.1e-67 260.0 167 77.2
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 1.8e-67 259.2 140 87.9
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 1.8e-67 259.2 140 87.9
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 5.3e-67 257.7 140 86.4
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 5.3e-67 257.7 140 87.9
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 1.2e-66 256.5 140 87.1
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 1.2e-66 256.5 140 87.1
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 4.5e-66 254.6 140 85.7
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 4.5e-66 254.6 140 85.7
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 1.7e-65 252.7 138 84.8
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 2.9e-65 251.9 140 85.7
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 2.9e-65 251.9 140 87.1
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 5.0e-65 251.1 205 65.9
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 8.5e-65 250.4 138 85.5
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 1.1e-64 250.0 202 65.3
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-64 249.6 140 85.7
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 1.4e-64 249.6 140 85.7
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 1.4e-64 249.6 140 85.7
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 1.4e-64 249.6 140 85.7
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 1.6e-63 246.1 168 73.8
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 1.0e-62 243.4 138 82.6
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 2.3e-62 242.3 153 79.1
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 4.4e-61 238.0 141 83.0
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 1.4e-59 233.0 141 74.5
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 5.3e-59 231.1 129 83.7
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 7.0e-59 230.7 140 80.0
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 5.5e-56 221.1 138 73.2
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 2.2e-52 209.1 119 82.4
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 8.2e-52 207.2 114 86.0
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 3.1e-51 205.3 138 65.2
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 5.3e-51 204.5 160 65.6
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 5.9e-50 201.1 133 66.9
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 8.5e-49 197.2 121 80.2
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 1.9e-48 196.1 99 92.9
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 1.0e-46 190.3 97 91.8
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 1.7e-44 183.0 117 77.8
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 1.2e-31 140.2 71 95.8
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.6e-29 132.5 71 90.1
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 4.4e-29 131.7 139 48.2
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.2e-28 129.4 71 87.3
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 2.4e-27 125.9 71 84.5
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 7.8e-26 120.9 140 48.6
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 3.0e-17 92.4 43 97.7
Cfa022471 Carpinus fangiana HOM05D000441 ORTHO05D124224 5.8e-13 78.2 161 32.9
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 2.9e-12 75.9 155 31.6
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 2.9e-12 75.9 53 67.9
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 3.7e-12 75.5 117 37.6
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 9.2e-11 70.9 44 75.0
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 5.6e-08 61.6 36 72.2
Cre13.g571600 Chlamydomonas reinhardtii HOM05D004554 ORTHO05D005360 6.2e-07 58.2 133 28.6
C03p66780 Brassica napus HOM05D046457 ORTHO05D032727 6.8e-06 54.7 83 37.3


User provided reference genes

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