Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI31G0152 Tripterygium wilfordii HOM05D004062 ORTHO05D004417 7.6e-63 243.8 137 100.0
Prupe.1G317700 Prunus persica HOM05D004062 ORTHO05D004417 4.1e-24 115.2 126 53.2
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.2e-23 113.6 129 50.4
Haze_00662 Corylus avellana HOM05D004062 ORTHO05D004417 2.0e-23 112.8 133 48.1
FvH4_4g26630 Fragaria vesca HOM05D004062 ORTHO05D004417 2.0e-23 112.8 136 47.8
FAN12G0456 Fragaria x ananassa HOM05D004062 ORTHO05D004417 2.0e-23 112.8 136 47.8
FAN12G4350 Fragaria x ananassa HOM05D004062 ORTHO05D004417 2.0e-23 112.8 136 47.8
FAN07G0543 Fragaria x ananassa HOM05D004062 ORTHO05D004417 2.6e-23 112.5 136 47.8
FAN17G2092 Fragaria x ananassa HOM05D004062 ORTHO05D004417 3.5e-23 112.1 136 47.1
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 3.5e-23 112.1 129 51.9
FAN22G1760 Fragaria x ananassa HOM05D004062 ORTHO05D004417 7.7e-23 110.9 136 47.1
Prupe.1G317600 Prunus persica HOM05D004062 ORTHO05D004417 2.2e-22 109.4 126 50.0
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 1.1e-21 107.1 128 50.0
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.2e-21 105.1 143 49.7
Eucgr.B02857 Eucalyptus grandis HOM05D004062 ORTHO05D004417 7.2e-21 104.4 135 48.1
PGR102G0077 Punica granatum HOM05D004062 ORTHO05D004417 3.6e-20 102.1 132 45.5
FAN12G3833 Fragaria x ananassa HOM05D004062 ORTHO05D004417 8.0e-20 100.9 138 48.6
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.0e-19 99.0 134 48.5
FvH4_4g26590 Fragaria vesca HOM05D004062 ORTHO05D004417 3.0e-19 99.0 133 49.6
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.2e-18 97.1 132 44.7
FAN07G0530 Fragaria x ananassa HOM05D004062 ORTHO05D004417 2.0e-18 96.3 133 48.9
RcHm_v2.0_Chr4g0434241 Rosa chinensis HOM05D004062 ORTHO05D004417 2.6e-18 95.9 130 49.2
Thecc.02G220400 Theobroma cacao HOM05D004062 ORTHO05D004417 3.4e-18 95.5 137 45.3
FvH4_4g26620 Fragaria vesca HOM05D004062 ORTHO05D004417 4.4e-18 95.1 133 48.1
FAN12G1602 Fragaria x ananassa HOM05D004062 ORTHO05D004417 4.4e-18 95.1 133 48.1
FAN22G1832 Fragaria x ananassa HOM05D004062 ORTHO05D004417 7.5e-18 94.4 133 48.9
FAN17G2061 Fragaria x ananassa HOM05D004062 ORTHO05D004417 9.7e-18 94.0 133 48.1
Ciclev10017934m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.3e-17 93.6 130 49.2
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.7e-17 92.0 135 45.9
FAN12G1821 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.1e-16 90.5 133 45.9
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.4e-16 90.1 137 40.9
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.8e-16 89.7 133 44.4
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.4e-16 89.4 132 44.7
FvH4_4g26582 Fragaria vesca HOM05D004062 ORTHO05D004417 3.1e-16 89.0 131 44.3
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 4.1e-16 88.6 122 46.7
Dinv16146 Davidia involucrata HOM05D004062 ORTHO05D004417 7.0e-16 87.8 125 45.6
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 9.1e-16 87.4 125 46.4
Hma1.2p1_0767F.1_g215470 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 2.0e-15 86.3 122 46.7
FAN22G1944 Fragaria x ananassa HOM05D004062 ORTHO05D004417 3.5e-15 85.5 131 43.5
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 3.5e-15 85.5 125 46.4
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 1.0e-14 84.0 132 43.9
CANSAT01G2259 Cannabis sativa HOM05D004062 ORTHO05D004417 1.3e-14 83.6 127 44.1
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.9e-14 82.4 127 43.3
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 3.8e-14 82.0 125 44.8
CiPaw.05G243400 Carya illinoinensis HOM05D004062 ORTHO05D004417 5.0e-14 81.6 121 42.1
Ciclev10017483m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.0e-14 81.6 134 41.0
Atru.chr11.263 Acer truncatum HOM05D004062 ORTHO05D004417 6.5e-14 81.3 124 45.2
Atru.chr11.283 Acer truncatum HOM05D004062 ORTHO05D004417 6.5e-14 81.3 124 45.2
Cfa015828 Carpinus fangiana HOM05D004062 ORTHO05D004417 1.1e-13 80.5 99 48.5
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.1e-13 80.5 127 43.3
Cc11_g09580 Coffea canephora HOM05D004062 ORTHO05D004417 1.1e-13 80.5 127 40.9
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 2.5e-13 79.3 132 41.7
ClCG01G005940 Citrullus lanatus HOM05D004062 ORTHO05D004417 3.2e-13 79.0 131 39.7
Eucgr.G02232 Eucalyptus grandis HOM05D004062 ORTHO05D004417 3.2e-13 79.0 130 38.5
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 7.2e-13 77.8 109 43.1
Rhsim09G0103100 Rhododendron simsii HOM05D004062 ORTHO05D004417 7.2e-13 77.8 130 36.9
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 1.2e-12 77.0 132 39.4
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.6e-12 76.6 125 42.4
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.7e-12 75.9 135 43.0
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.7e-12 75.1 131 42.7
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 6.1e-12 74.7 132 37.1
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 6.1e-12 74.7 124 42.7
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 8.0e-12 74.3 131 38.2
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.0e-11 73.9 132 40.2
MELO3C005337.2 Cucumis melo HOM05D004062 ORTHO05D004417 1.0e-11 73.9 132 37.9
Cfa015829 Carpinus fangiana HOM05D004062 ORTHO05D004417 1.8e-11 73.2 91 49.5
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 1.8e-11 73.2 136 34.6
Manes.14G107900 Manihot esculenta HOM05D004062 ORTHO05D004417 1.8e-11 73.2 133 39.8
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 3.0e-11 72.4 134 37.3
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.0e-11 72.0 137 39.4
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 1.5e-10 70.1 137 35.0
Ciclev10013069m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.0e-10 69.7 133 39.1
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 2.6e-10 69.3 137 38.7
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 2.6e-10 69.3 131 36.6
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 3.4e-10 68.9 124 40.3
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 5.7e-10 68.2 129 38.8
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 5.7e-10 68.2 133 36.1
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 7.5e-10 67.8 137 38.0
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.3e-09 67.0 123 40.7
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 1.7e-09 66.6 124 37.9
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 2.2e-09 66.2 132 37.1
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.8e-09 65.9 128 41.4
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 2.8e-09 65.9 127 41.7
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 2.8e-09 65.9 126 38.9
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 3.7e-09 65.5 130 36.2
HPP92_009718 Vanilla planifolia HOM05D004062 ORTHO05D004417 3.7e-09 65.5 123 36.6
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.8e-09 65.1 123 34.1
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.8e-09 65.1 123 34.1
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.4e-08 63.5 129 37.2
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 1.4e-08 63.5 122 38.5
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 1.8e-08 63.2 133 33.1
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.8e-08 63.2 122 39.3
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.8e-08 63.2 122 39.3
Actinidia14929 Actinidia chinensis HOM05D004062 ORTHO05D004417 2.4e-08 62.8 132 36.4
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 7.0e-08 61.2 125 36.0
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 9.1e-08 60.8 128 36.7
CsaV3_5G028760 Cucumis sativus L. HOM05D004062 ORTHO05D004417 1.2e-07 60.5 114 36.0
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.6e-07 60.1 125 36.0
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 1.6e-07 60.1 131 35.9
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 2.7e-07 59.3 133 32.3
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 3.5e-07 58.9 125 35.2
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 4.5e-07 58.5 122 35.2
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 5.9e-07 58.2 131 32.8
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 7.7e-07 57.8 131 36.6
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 1.3e-06 57.0 140 35.0
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 1.3e-06 57.0 123 30.9
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 2.3e-06 56.2 133 33.1
Rhsim13G0007500 Rhododendron simsii HOM05D003529 ORTHO05D004106 2.3e-06 56.2 129 37.2
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.9e-06 55.8 129 31.0
SGA_v2.0_scaffold334G49044 Striga asiatica HOM05D003529 ORTHO05D004106 2.9e-06 55.8 124 36.3
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 5.0e-06 55.1 121 37.2
CsaV3_4G001080 Cucumis sativus L. HOM05D003529 ORTHO05D004106 6.6e-06 54.7 134 33.6
Oeu008332.1 Olea europaea HOM05D003529 ORTHO05D004106 8.6e-06 54.3 133 34.6


User provided reference genes

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