Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 1.0e-55 219.9 120 100.0
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 1.6e-40 169.5 121 77.7
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 6.3e-37 157.5 121 75.2
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 1.1e-36 156.8 121 73.6
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 1.8e-36 156.0 121 71.9
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 2.4e-36 155.6 120 70.8
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 3.1e-36 155.2 121 71.1
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 9.1e-36 153.7 120 72.5
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 2.6e-35 152.1 121 71.1
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 3.5e-35 151.8 121 72.7
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 5.0e-34 147.9 117 73.5
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 5.0e-34 147.9 125 71.2
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 6.5e-34 147.5 121 68.6
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 8.5e-34 147.1 121 69.4
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 1.1e-33 146.7 121 71.1
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 1.1e-33 146.7 121 71.1
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 1.1e-33 146.7 121 67.8
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 1.1e-33 146.7 121 70.2
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 1.4e-33 146.4 121 68.6
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 1.9e-33 146.0 122 70.5
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 1.9e-33 146.0 122 70.5
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 1.9e-33 146.0 119 69.7
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 2.5e-33 145.6 123 70.7
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 4.2e-33 144.8 121 70.2
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 9.4e-33 143.7 120 68.3
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 9.4e-33 143.7 120 69.2
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 1.2e-32 143.3 121 67.8
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 1.2e-32 143.3 125 68.0
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 1.2e-32 143.3 121 66.1
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 1.6e-32 142.9 119 68.1
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 2.1e-32 142.5 120 68.3
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 4.7e-32 141.4 123 68.3
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 4.7e-32 141.4 116 70.7
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 8.0e-32 140.6 121 65.3
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 1.4e-31 139.8 120 65.0
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 1.8e-31 139.4 121 65.3
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 3.0e-31 138.7 122 68.9
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 8.8e-31 137.1 122 67.2
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 8.8e-31 137.1 122 65.6
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 8.8e-31 137.1 121 66.1
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 1.1e-30 136.7 121 64.5
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 1.1e-30 136.7 123 65.0
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 2.0e-30 136.0 121 65.3
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 2.6e-30 135.6 122 66.4
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 2.6e-30 135.6 123 63.4
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 3.3e-30 135.2 123 64.2
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 4.4e-30 134.8 120 65.8
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 4.4e-30 134.8 122 66.4
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 4.4e-30 134.8 121 66.1
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 7.4e-30 134.0 124 65.3
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 1.3e-29 133.3 122 64.8
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 1.3e-29 133.3 120 63.3
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 2.2e-29 132.5 117 65.8
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 2.2e-29 132.5 123 65.0
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 2.8e-29 132.1 122 63.9
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 3.7e-29 131.7 107 73.8
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 3.7e-29 131.7 117 68.4
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 4.8e-29 131.3 129 62.0
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 4.8e-29 131.3 117 65.0
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 4.8e-29 131.3 121 63.6
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 8.2e-29 130.6 120 62.5
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 8.2e-29 130.6 120 62.5
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 1.1e-28 130.2 122 63.9
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 1.4e-28 129.8 121 64.5
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 1.8e-28 129.4 122 63.9
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.8e-28 129.4 120 64.2
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 3.1e-28 128.6 120 63.3
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 5.3e-28 127.9 120 62.5
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 5.3e-28 127.9 120 61.7
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 9.1e-28 127.1 120 63.3
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 1.6e-27 126.3 120 58.3
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 2.0e-27 125.9 123 64.2
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 5.9e-27 124.4 129 60.5
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 7.7e-27 124.0 122 62.3
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.0e-26 123.6 122 63.9
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 1.3e-26 123.2 123 61.0
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 1.3e-26 123.2 123 61.0
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 6.5e-26 120.9 121 62.8
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 6.5e-26 120.9 123 59.3
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 8.5e-26 120.6 120 58.3
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 9.4e-25 117.1 122 59.8
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 1.6e-24 116.3 120 58.3
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 2.1e-24 115.9 120 61.7
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 6.1e-24 114.4 120 56.7
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 6.1e-24 114.4 121 57.0
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 6.1e-24 114.4 121 61.2
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 8.0e-24 114.0 108 63.9
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 8.0e-24 114.0 121 60.3
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 1.0e-23 113.6 120 58.3
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 2.3e-23 112.5 120 59.2
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 5.2e-23 111.3 122 56.6
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 1.2e-22 110.2 121 59.5
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 1.2e-22 110.2 157 51.0
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 2.0e-22 109.4 121 57.9
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 2.0e-22 109.4 121 57.9
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 2.0e-22 109.4 121 57.9
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 2.6e-22 109.0 120 58.3
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 2.6e-22 109.0 123 56.9
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 2.6e-22 109.0 122 54.9
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 3.3e-22 108.6 121 57.0
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 3.3e-22 108.6 121 59.5
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 3.3e-22 108.6 121 59.5
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 3.3e-22 108.6 121 59.5
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.5e-22 107.5 121 57.0
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 9.7e-22 107.1 119 57.1
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 9.7e-22 107.1 119 57.1
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 1.3e-21 106.7 121 57.0
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 1.7e-21 106.3 118 56.8
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 1.4e-20 103.2 115 52.2
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 1.8e-20 102.8 115 51.3
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 5.3e-20 101.3 120 53.3
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 5.9e-19 97.8 116 54.3
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 1.3e-18 96.7 123 52.8
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 2.2e-18 95.9 123 52.8
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 6.5e-18 94.4 120 54.2
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 8.5e-18 94.0 120 49.2
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 4.2e-17 91.7 122 48.4
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 7.2e-17 90.9 119 52.1
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 1.2e-16 90.1 112 50.0
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 1.6e-16 89.7 108 54.6
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.6e-16 89.7 74 70.3
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.6e-16 89.7 74 70.3
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 2.1e-16 89.4 118 51.7
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 2.3e-15 85.9 67 70.1
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 3.0e-15 85.5 126 47.6
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 5.2e-15 84.7 120 46.7
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 6.8e-15 84.3 79 58.2
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 2.6e-14 82.4 79 57.0
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 3.4e-14 82.0 87 60.9
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 5.7e-14 81.3 128 46.9
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 7.5e-14 80.9 76 60.5
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 7.5e-14 80.9 116 48.3
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.7e-13 79.7 79 55.7
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.7e-13 79.7 75 62.7
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 2.8e-13 79.0 86 53.5
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 3.7e-13 78.6 92 54.3
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.2e-11 73.6 57 71.9
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 2.7e-11 72.4 89 52.8
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 3.5e-11 72.0 86 48.8
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 4.5e-11 71.6 101 47.5
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 4.5e-11 71.6 200 36.5
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.7e-11 70.9 79 62.0
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 7.7e-11 70.9 89 50.6
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 4.0e-07 58.5 116 40.5
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 2.6e-06 55.8 131 35.9
Cpa.g.sc32.38 Carica papaya HOM05D004934 ORTHO05D005924 2.6e-06 55.8 34 82.4
SEGI_07969 Sequoiadendron giganteum HOM05D004934 ORTHO05D005924 4.4e-06 55.1 48 64.6


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