Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 2.7e-89 332.0 172 100.0
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.2e-43 179.5 177 61.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 4.9e-43 178.3 142 70.4
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 4.2e-42 175.3 144 68.1
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.1e-39 167.2 171 60.2
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 2.5e-39 166.0 144 66.0
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.6e-39 164.9 144 65.3
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.6e-38 163.3 144 68.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.1e-38 162.9 140 65.7
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 3.7e-38 162.2 142 66.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 6.2e-38 161.4 149 65.8
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.4e-37 159.5 146 64.4
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 4.0e-37 158.7 146 64.4
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 9.0e-37 157.5 146 63.7
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.5e-36 156.8 144 61.8
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 2.0e-36 156.4 144 63.9
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 2.0e-36 156.4 146 63.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 3.4e-36 155.6 143 63.6
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 3.4e-36 155.6 145 64.8
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.8e-36 154.8 143 65.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 5.8e-36 154.8 144 61.1
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.8e-36 154.8 143 57.3
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 7.6e-36 154.5 160 60.6
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 7.6e-36 154.5 146 63.0
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.7e-35 153.3 143 55.9
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.2e-35 152.9 144 58.3
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 2.9e-35 152.5 141 62.4
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.9e-35 152.5 144 61.8
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 2.9e-35 152.5 144 63.2
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.8e-35 152.1 136 64.7
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 4.9e-35 151.8 144 62.5
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 3.2e-34 149.1 144 62.5
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 4.2e-34 148.7 145 62.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 5.5e-34 148.3 144 63.2
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 5.5e-34 148.3 144 59.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 7.1e-34 147.9 144 61.1
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 7.1e-34 147.9 145 61.4
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 9.3e-34 147.5 145 62.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.2e-33 147.1 145 62.1
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.6e-33 146.7 144 61.1
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.1e-33 146.4 145 60.7
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.7e-33 146.0 135 63.0
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.7e-33 146.0 145 61.4
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.5e-33 145.6 146 61.6
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 3.5e-33 145.6 147 63.3
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 6.0e-33 144.8 150 61.3
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.0e-33 144.8 144 60.4
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 7.9e-33 144.4 143 60.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.0e-32 144.1 144 61.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 1.3e-32 143.7 129 62.8
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.3e-32 143.7 144 61.1
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 1.8e-32 143.3 147 63.9
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 2.3e-32 142.9 140 61.4
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.0e-32 142.5 135 62.2
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.0e-32 142.5 142 57.0
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 5.1e-32 141.7 143 57.3
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.1e-31 140.6 145 60.7
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.1e-31 140.6 126 65.9
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.5e-31 140.2 149 60.4
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.9e-31 139.8 144 59.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.3e-31 139.0 131 61.8
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 3.3e-31 139.0 147 58.5
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.3e-31 138.7 131 61.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 4.3e-31 138.7 145 55.2
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 5.7e-31 138.3 84 89.3
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 9.7e-31 137.5 144 61.8
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.3e-30 137.1 145 60.7
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 8.2e-30 134.4 148 58.8
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.4e-29 133.7 153 56.9
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.4e-29 132.9 151 58.3
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 4.1e-29 132.1 84 85.7
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 5.3e-29 131.7 146 56.8
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 5.3e-29 131.7 146 56.8
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.0e-28 129.8 136 58.1
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 5.9e-28 128.3 103 69.9
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 5.9e-28 128.3 147 53.7
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.2e-27 126.3 148 54.1
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.2e-27 126.3 148 54.1
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.9e-27 125.9 144 54.2
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 3.8e-27 125.6 151 54.3
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 6.5e-27 124.8 148 53.4
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 8.5e-27 124.4 148 53.4
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 8.5e-27 124.4 148 53.4
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 8.5e-27 124.4 153 52.9
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.4e-26 123.6 154 55.2
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.4e-26 123.6 131 58.8
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.4e-26 123.6 82 80.5
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.5e-26 122.9 82 79.3
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.5e-26 122.9 131 58.0
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 5.5e-26 121.7 153 51.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.5e-26 121.7 158 53.8
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 6.1e-25 118.2 163 52.1
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 6.1e-25 118.2 104 61.5
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 7.9e-25 117.9 131 55.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 5.1e-24 115.2 145 51.7
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 6.7e-24 114.8 131 54.2
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 4.3e-23 112.1 84 71.4
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 5.7e-23 111.7 146 48.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 7.4e-23 111.3 121 54.5
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.3e-22 110.5 150 51.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.1e-21 107.5 150 49.3
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 4.5e-20 102.1 77 67.5
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.9e-18 96.7 71 73.2
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.9e-18 96.7 113 50.4
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.6e-17 93.6 98 54.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.6e-17 92.4 97 51.5
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 5.7e-15 85.1 84 52.4
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 7.4e-15 84.7 84 54.8
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 6.3e-14 81.6 101 44.6
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.8e-13 80.1 55 76.4
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 6.9e-13 78.2 78 50.0
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.0e-12 76.6 110 48.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.4e-10 70.5 85 43.5
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.4e-10 70.5 107 49.5
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.2e-10 69.3 92 46.7
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.7e-06 57.0 52 55.8
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 4.8e-06 55.5 32 81.2


User provided reference genes

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