Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.7e-63 245.7 118 100.0
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.8e-37 158.7 99 77.8
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.3e-23 112.5 108 49.1
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.1e-20 103.6 97 50.5
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 2.4e-20 102.4 97 48.5
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.2e-19 100.1 96 50.0
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.2e-19 100.1 97 47.4
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 1.5e-19 99.8 97 48.5
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.6e-19 99.0 99 48.5
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.7e-18 96.3 110 45.5
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.7e-18 96.3 100 46.0
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.2e-18 95.9 99 44.4
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 2.2e-18 95.9 97 46.4
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 3.8e-18 95.1 97 44.3
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.4e-18 94.4 100 45.0
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 8.4e-18 94.0 100 45.0
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.9e-17 92.8 103 48.5
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 5.4e-17 91.3 97 49.5
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 5.4e-17 91.3 98 46.9
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 4.6e-16 88.2 95 43.2
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 3.0e-15 85.5 96 42.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 8.7e-15 84.0 96 41.7
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 1.1e-14 83.6 93 41.9
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.6e-13 79.7 94 43.6
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 2.8e-13 79.0 97 42.3
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 6.2e-13 77.8 97 35.1
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.1e-13 77.4 97 35.1
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.1e-12 77.0 96 40.6
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.1e-12 77.0 96 39.6
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.8e-12 76.3 96 40.6
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.4e-12 75.9 100 39.0
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 3.1e-12 75.5 96 40.6
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 4.0e-12 75.1 96 39.6
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 4.0e-12 75.1 108 41.7
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 5.3e-12 74.7 96 40.6
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 5.3e-12 74.7 92 41.3
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 6.9e-12 74.3 101 44.6
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.2e-11 73.6 113 34.5
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 2.0e-11 72.8 93 39.8
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.6e-11 72.4 97 34.0
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 2.6e-11 72.4 94 37.2
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.5e-11 71.6 100 38.0
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 9.9e-11 70.5 107 36.4
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.7e-10 69.7 95 32.6
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 2.9e-10 68.9 97 39.2
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 4.9e-10 68.2 99 36.4
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 8.4e-10 67.4 91 38.5
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 1.1e-09 67.0 101 36.6
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.1e-09 67.0 102 33.3
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.4e-09 65.9 97 40.2
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.2e-09 65.5 97 39.2
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 4.2e-09 65.1 91 36.3
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.2e-09 65.1 97 38.1
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 5.5e-09 64.7 96 38.5
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 5.5e-09 64.7 97 36.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.2e-08 63.5 94 38.3
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.2e-08 63.5 97 33.0
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 1.6e-08 63.2 91 31.9
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.7e-08 62.4 98 34.7
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 3.5e-08 62.0 91 36.3
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 4.6e-08 61.6 69 40.6
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 4.6e-08 61.6 94 33.0
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 4.6e-08 61.6 97 30.9
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 7.9e-08 60.8 97 36.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 7.9e-08 60.8 95 30.5
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.3e-07 60.1 72 41.7
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.3e-07 60.1 95 34.7
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.3e-07 60.1 94 34.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 5.1e-07 58.2 99 32.3
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 6.7e-07 57.8 81 37.0
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 8.7e-07 57.4 92 35.9
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.9e-06 56.2 91 33.0
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.5e-06 55.8 80 33.8
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 4.3e-06 55.1 95 34.7


User provided reference genes

Program Settings