Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 1.7e-282 975.3 483 100.0
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 4.6e-147 525.4 492 56.3
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.4e-143 513.8 487 55.2
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.7e-141 506.9 488 54.5
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 5.5e-140 501.9 493 54.0
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.1e-135 487.6 488 53.7
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 1.8e-135 486.9 485 53.0
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 1.2e-134 484.2 489 51.7
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 1.1e-132 477.6 490 52.2
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.2e-132 476.1 486 51.6
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 9.4e-132 474.6 505 50.9
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 7.9e-131 471.5 486 51.0
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 1.0e-130 471.1 490 51.0
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 6.7e-130 468.4 470 54.0
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 9.7e-129 464.5 479 52.0
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 1.7e-128 463.8 477 52.8
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 2.4e-127 459.9 476 52.1
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 5.9e-126 455.3 478 51.7
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 7.7e-126 454.9 486 51.0
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 6.7e-122 441.8 518 48.3
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 2.6e-121 439.9 521 47.4
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 8.5e-117 424.9 461 50.1
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 5.5e-116 422.2 492 48.0
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 1.6e-115 420.6 478 47.3
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 6.1e-115 418.7 460 49.3
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 8.8e-114 414.8 480 47.3
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 5.7e-113 412.1 449 50.3
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 2.2e-112 410.2 474 46.6
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.1e-111 406.0 443 51.2
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 8.0e-107 391.7 423 51.8
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 5.2e-106 389.0 423 51.8
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 9.7e-105 384.8 473 46.5
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 2.2e-104 383.6 475 45.1
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 2.2e-104 383.6 497 45.3
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 6.3e-104 382.1 464 45.7
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 7.7e-102 375.2 475 44.4
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 1.3e-101 374.4 476 45.2
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 2.9e-101 373.2 475 45.3
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 4.2e-100 369.4 477 44.9
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.4e-98 364.4 482 43.6
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.3e-98 363.6 521 40.1
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 5.2e-98 362.5 477 43.2
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 5.2e-98 362.5 477 43.2
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 1.3e-96 357.8 477 43.2
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 1.3e-96 357.8 477 43.2
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 1.1e-92 344.7 331 54.4
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 1.5e-92 344.4 457 43.1
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 4.2e-92 342.8 487 40.7
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 2.8e-91 340.1 488 40.8
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 6.8e-90 335.5 456 42.5
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 6.3e-88 328.9 478 40.8
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 8.3e-88 328.6 420 43.3
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 2.9e-85 320.1 472 39.8
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 5.2e-82 309.3 421 43.2
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.2e-81 308.1 481 39.7
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 3.7e-80 303.1 491 38.3
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 4.9e-80 302.8 392 44.1
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 5.6e-76 289.3 420 40.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.2e-73 281.6 471 38.0
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 1.3e-72 278.1 436 39.2
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.3e-72 278.1 468 37.8
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 1.9e-71 274.2 481 36.4
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 2.7e-70 270.4 412 39.1
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 3.5e-70 270.0 475 36.2
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 1.3e-69 268.1 222 58.1
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 5.6e-68 262.7 244 57.4
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 6.4e-64 249.2 248 54.8
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 9.2e-63 245.4 482 32.2
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 6.6e-61 239.2 480 34.8
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 1.5e-57 228.0 320 40.6
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 2.6e-49 200.7 230 46.1
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 8.4e-40 169.1 311 34.1
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 2.4e-39 167.5 257 38.9
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.5e-31 141.0 89 73.0
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 1.7e-24 118.2 420 26.4
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 7.1e-23 112.8 149 40.9
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 9.0e-18 95.9 284 26.8
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 7.2e-15 86.3 54 63.0
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 7.9e-14 82.8 55 63.6
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 1.5e-12 78.6 51 64.7
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 4.8e-11 73.6 453 21.4
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 2.6e-09 67.8 205 24.9
C07p26600 Brassica napus HOM05D007808 ORTHO05D009895 2.2e-08 64.7 130 38.5
BraA06t27623Z Brassica rapa HOM05D007808 ORTHO05D009895 9.4e-07 59.3 110 40.0
TWI12G0580 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.1e-06 58.2 56 55.4


User provided reference genes

Program Settings