Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 3.4e-135 485.0 235 100.0
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 8.7e-99 364.0 233 73.4
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 3.3e-98 362.1 234 74.4
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.6e-97 359.8 234 73.9
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.8e-97 358.2 240 73.3
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 8.1e-97 357.5 236 73.3
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.4e-96 355.9 243 71.6
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.2e-95 353.6 230 73.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.3e-94 350.1 237 73.8
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 2.9e-94 349.0 237 73.0
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.4e-93 345.9 235 73.2
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 9.3e-93 344.0 243 67.5
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 3.5e-92 342.0 238 71.0
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.7e-91 339.7 232 70.3
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 5.1e-91 338.2 234 69.2
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 5.1e-91 338.2 237 68.4
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 6.6e-91 337.8 238 68.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.1e-90 337.0 232 70.7
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 7.4e-90 334.3 234 69.2
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 2.8e-89 332.4 234 68.8
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 3.6e-89 332.0 203 75.9
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.1e-88 330.5 231 68.4
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 4.0e-88 328.6 239 68.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.2e-87 327.0 205 75.1
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 3.4e-87 325.5 234 66.7
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 2.9e-86 322.4 237 66.2
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 7.1e-85 317.8 233 67.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 1.3e-83 313.5 234 65.0
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-83 312.0 247 63.6
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.3e-81 307.0 212 68.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 6.2e-81 304.7 244 64.8
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 6.2e-81 304.7 235 63.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-80 303.5 223 65.9
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 3.1e-80 302.4 235 63.4
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 6.9e-80 301.2 234 63.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 6.9e-80 301.2 235 63.4
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 2.0e-79 299.7 234 61.1
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 7.1e-77 291.2 239 61.5
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.1e-76 289.7 228 60.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.7e-76 289.3 235 60.9
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.5e-76 288.9 237 60.3
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 4.6e-76 288.5 240 58.8
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.0e-75 287.3 235 64.3
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.3e-75 287.0 235 61.3
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 6.7e-75 284.6 233 61.4
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.1e-74 283.9 240 60.8
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 1.1e-74 283.9 281 56.2
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 1.5e-74 283.5 218 64.7
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 3.3e-74 282.3 249 57.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 7.4e-74 281.2 280 55.4
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 7.4e-74 281.2 236 58.9
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 9.6e-74 280.8 180 73.3
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 9.6e-74 280.8 236 59.3
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.3e-73 280.4 249 57.8
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.3e-73 280.4 234 59.4
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.8e-73 278.5 222 60.4
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.1e-72 277.3 236 56.8
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.8e-72 276.6 233 59.2
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 2.4e-72 276.2 246 59.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 4.1e-72 275.4 234 58.5
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 5.3e-72 275.0 235 59.1
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 9.0e-72 274.2 237 58.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 9.0e-72 274.2 234 59.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.2e-71 273.9 235 59.6
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.5e-71 273.5 234 59.0
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.5e-71 273.5 233 59.7
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 3.4e-71 272.3 196 68.9
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.6e-71 271.2 249 59.8
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.9e-70 269.2 183 70.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 6.5e-70 268.1 231 59.7
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 8.4e-70 267.7 218 60.6
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 8.4e-70 267.7 244 57.0
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.4e-69 266.9 211 60.7
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.4e-69 266.9 211 60.7
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 3.2e-69 265.8 235 60.0
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 7.2e-69 264.6 194 64.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-68 263.8 235 59.6
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.6e-68 263.5 235 57.9
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 6.1e-68 261.5 228 56.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 4.3e-66 255.4 265 52.8
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 4.8e-65 251.9 171 72.5
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 8.2e-65 251.1 236 55.9
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.3e-62 243.8 208 58.7
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.2e-61 238.8 222 54.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 5.5e-61 238.4 217 55.8
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 2.1e-60 236.5 178 64.6
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.0e-59 234.2 232 54.7
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.4e-59 233.8 150 70.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 4.8e-57 225.3 165 64.8
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.3e-56 221.9 172 62.2
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.2e-55 220.7 203 56.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 7.7e-55 218.0 215 51.6
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.3e-54 217.2 177 60.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-53 212.6 162 62.3
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 4.2e-53 212.2 227 49.8
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.0e-50 203.4 139 65.5
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 6.3e-49 198.4 213 47.4
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.2e-45 184.9 152 62.5
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.4e-42 175.6 142 64.1
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 7.5e-42 174.9 205 46.3
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.3e-38 164.1 212 45.3
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 8.5e-38 161.4 185 45.9
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 8.5e-38 161.4 159 52.8
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.5e-37 159.8 124 59.7
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 3.7e-25 119.4 128 49.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 8.6e-22 108.2 60 76.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.3e-21 105.9 71 66.2
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.8e-19 100.5 69 69.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 7.5e-18 95.1 138 35.5
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.2e-16 89.7 57 73.7
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.0e-16 88.6 178 34.8
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 8.6e-14 81.6 181 30.9
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 6.2e-12 75.5 81 46.9
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 8.0e-12 75.1 151 33.1
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 4.0e-11 72.8 73 49.3
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.4e-08 63.5 43 62.8
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.2e-08 63.2 62 51.6
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.6e-07 60.8 42 61.9
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.0e-07 58.9 98 35.7


User provided reference genes

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