Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 5.3e-50 200.7 99 100.0
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 8.5e-48 193.4 99 96.0
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 7.5e-44 180.3 97 88.7
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 2.3e-40 168.7 97 85.6
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 3.8e-40 167.9 97 80.4
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.8e-40 167.9 97 80.4
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 6.5e-40 167.2 96 83.3
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 8.6e-40 166.8 95 85.3
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 1.9e-39 165.6 96 82.3
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.6e-38 162.5 97 77.3
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 2.1e-38 162.2 95 78.9
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 2.8e-38 161.8 96 78.1
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 2.8e-38 161.8 99 79.8
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 3.6e-38 161.4 97 81.4
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.7e-38 161.0 97 81.4
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 4.7e-38 161.0 95 77.9
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 4.7e-38 161.0 98 81.6
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 8.0e-38 160.2 94 76.6
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 2.3e-37 158.7 94 75.5
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 5.2e-37 157.5 97 81.4
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 5.2e-37 157.5 97 81.4
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 8.8e-37 156.8 95 78.9
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 76.0
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 76.0
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 76.0
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 76.0
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.5e-36 156.0 97 78.4
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 1.5e-36 156.0 96 75.0
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 2.0e-36 155.6 95 75.8
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 2.0e-36 155.6 96 79.2
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 2.0e-36 155.6 97 78.4
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 2.6e-36 155.2 99 77.8
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 77.3
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 3.4e-36 154.8 97 77.3
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 3.4e-36 154.8 99 77.8
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 78.4
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 79.4
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 79.4
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 77.3
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 77.3
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 4.4e-36 154.5 99 73.7
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 4.4e-36 154.5 97 78.4
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 4.4e-36 154.5 98 79.6
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 5.7e-36 154.1 97 77.3
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 5.7e-36 154.1 96 80.2
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 7.5e-36 153.7 96 78.1
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 9.8e-36 153.3 101 76.2
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 9.8e-36 153.3 96 80.2
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 9.8e-36 153.3 96 80.2
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 1.3e-35 152.9 99 78.8
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 1.7e-35 152.5 92 77.2
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 1.7e-35 152.5 101 76.2
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 72.9
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 72.9
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 72.9
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.2e-35 152.1 95 76.8
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.8e-35 151.8 95 76.8
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 3.7e-35 151.4 97 76.3
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 4.9e-35 151.0 98 78.6
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 6.3e-35 150.6 96 75.0
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 8.3e-35 150.2 96 72.9
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 8.3e-35 150.2 94 72.3
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 8.3e-35 150.2 98 77.6
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.1e-34 149.8 97 76.3
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 1.4e-34 149.4 96 72.9
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.4e-34 149.4 96 77.1
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.8e-34 149.1 95 73.7
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.8e-34 149.1 95 73.7
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 2.4e-34 148.7 96 75.0
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 3.1e-34 148.3 97 76.3
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.1e-34 148.3 97 74.2
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 4.1e-34 147.9 97 76.3
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 4.1e-34 147.9 97 76.3
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 5.4e-34 147.5 95 71.6
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 7.0e-34 147.1 99 76.8
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.6e-33 146.0 92 71.7
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 1.6e-33 146.0 98 73.5
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 97 71.1
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 3.5e-33 144.8 94 74.5
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 3.5e-33 144.8 94 74.5
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 5.9e-33 144.1 101 71.3
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 7.8e-33 143.7 96 77.1
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.3e-32 142.9 95 71.6
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 1.3e-32 142.9 99 73.7
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.3e-32 142.1 97 71.1
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 2.9e-32 141.7 97 74.2
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 8.6e-32 140.2 95 74.7
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.1e-31 139.8 96 75.0
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 9.5e-31 136.7 87 77.0
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 2.8e-30 135.2 96 68.8
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 1.0e-29 133.3 94 71.3
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.4e-29 132.9 82 76.8
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.3e-29 132.1 102 68.6
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 3.0e-29 131.7 94 69.1
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.0e-29 131.3 102 69.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 6.8e-29 130.6 97 68.0
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 8.9e-29 130.2 93 69.9
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.2e-28 129.8 95 70.5
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.0e-28 129.0 99 65.7
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.4e-28 127.9 97 68.0
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 9.8e-28 126.7 97 66.0
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 9.8e-28 126.7 100 67.0
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 9.8e-28 126.7 94 64.9
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.4e-26 122.9 101 65.3
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.4e-26 122.9 92 63.0
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.2e-26 121.7 84 75.0
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.2e-26 121.7 84 75.0
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 3.5e-25 118.2 96 62.5
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.3e-24 116.3 98 65.3
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.7e-24 115.9 81 69.1
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 6.6e-24 114.0 99 59.6
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 2.8e-22 108.6 94 59.6
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.1e-21 106.7 98 57.1
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 3.1e-21 105.1 94 64.9
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 5.2e-21 104.4 95 65.3
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.8e-21 104.0 76 67.1
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.8e-21 104.0 91 56.0
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.2e-20 103.2 100 59.0
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.6e-20 102.1 69 73.9
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.8e-20 100.9 99 53.5
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.2e-19 99.0 97 60.8
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 3.5e-17 91.7 101 52.5
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.7e-16 89.4 97 47.4
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 1.7e-16 89.4 96 51.0
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 1.9e-15 85.9 101 50.5
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 6.0e-09 64.3 40 70.0
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 7.8e-09 63.9 57 57.9
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 7.8e-09 63.9 88 39.8
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 1.3e-08 63.2 100 44.0
Zm00001eb421020 Zea mays HOM05D036862 ORTHO05D037215 8.6e-08 60.5 111 37.8
Zm00001eb085540 Zea mays HOM05D036862 ORTHO05D037215 1.1e-07 60.1 105 38.1
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 4.7e-06 54.7 43 67.4


User provided reference genes

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