Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.9e-101 372.5 185 100.0
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.8e-54 216.5 231 51.5
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.3e-54 216.1 233 52.8
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.8e-51 206.5 193 58.0
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 6.5e-49 198.0 217 52.1
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 5.5e-48 194.9 216 51.4
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.8e-46 189.9 236 46.6
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 3.9e-46 188.7 225 50.2
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 3.7e-44 182.2 200 52.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 4.8e-44 181.8 206 50.5
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 8.2e-44 181.0 233 45.5
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 2.4e-43 179.5 219 47.9
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 1.2e-42 177.2 228 48.2
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.6e-42 176.0 212 48.6
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 5.9e-42 174.9 240 44.2
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 2.2e-41 172.9 215 50.7
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 2.2e-41 172.9 196 51.0
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.8e-41 172.2 212 48.6
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 5.0e-41 171.8 212 47.2
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 8.5e-41 171.0 208 49.5
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 1.1e-40 170.6 231 46.3
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.2e-39 167.2 193 50.8
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 2.7e-39 166.0 160 56.9
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 3.9e-38 162.2 223 47.1
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 5.1e-38 161.8 229 43.7
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 8.8e-38 161.0 218 45.9
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.1e-37 160.6 145 56.6
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 2.0e-37 159.8 142 60.6
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 4.4e-37 158.7 212 45.3
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 9.7e-37 157.5 208 46.2
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 9.7e-37 157.5 213 45.5
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.7e-36 156.8 224 46.0
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 2.2e-36 156.4 211 45.5
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.8e-36 156.0 212 45.3
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 3.7e-36 155.6 207 47.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.8e-36 155.2 215 42.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 8.2e-36 154.5 173 51.4
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 1.4e-35 153.7 208 45.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.4e-35 153.7 205 44.4
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.8e-35 153.3 212 45.8
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.8e-35 153.3 223 44.4
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 4.1e-35 152.1 143 56.6
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 6.9e-35 151.4 207 46.4
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.2e-34 150.6 222 44.1
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 2.6e-34 149.4 206 45.6
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 3.4e-34 149.1 200 46.0
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 3.4e-34 149.1 224 45.5
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.7e-34 147.9 208 43.3
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 1.3e-33 147.1 204 43.1
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.3e-33 147.1 185 45.9
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.3e-33 147.1 145 55.2
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.3e-33 147.1 143 55.2
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.7e-33 146.7 230 40.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 2.9e-33 146.0 97 74.2
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 2.9e-33 146.0 206 45.6
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 3.8e-33 145.6 205 45.4
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 5.0e-33 145.2 285 37.2
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.1e-32 144.1 230 40.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.4e-32 143.7 99 69.7
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.9e-32 143.3 196 42.9
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.9e-32 143.3 141 53.9
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 1.9e-32 143.3 214 43.0
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.5e-32 142.9 218 41.7
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 5.5e-32 141.7 171 48.0
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.6e-31 140.2 209 41.6
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.1e-31 139.8 229 38.0
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.7e-31 139.4 230 40.0
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 4.7e-31 138.7 189 43.9
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 6.1e-31 138.3 177 44.6
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 6.1e-31 138.3 200 44.0
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 7.9e-31 137.9 212 42.5
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.8e-30 136.7 186 43.0
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 3.9e-30 135.6 103 66.0
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.4e-29 132.1 230 37.4
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 4.4e-29 132.1 240 35.0
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 7.4e-29 131.3 223 40.4
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 9.7e-29 131.0 101 61.4
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 2.2e-28 129.8 194 43.8
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.2e-28 129.8 240 34.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-28 129.8 101 61.4
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.8e-28 128.6 230 37.8
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 3.1e-27 125.9 192 41.7
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 5.3e-27 125.2 184 44.6
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.6e-26 122.9 101 56.4
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 7.7e-26 121.3 89 68.5
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.2e-25 119.8 188 42.0
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 2.2e-25 119.8 181 42.5
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.9e-25 119.4 228 35.5
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.1e-24 117.5 135 48.1
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.1e-24 117.5 135 48.1
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.1e-24 117.5 224 37.5
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.8e-22 110.2 233 35.2
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 4.0e-22 109.0 105 54.3
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 4.0e-22 109.0 105 54.3
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.2e-21 107.5 197 34.5
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.2e-21 107.5 197 34.5
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 5.3e-19 98.6 136 44.1
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.3e-17 94.0 76 59.2
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.6e-15 85.9 130 42.3
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 5.2e-14 82.0 151 32.5
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 3.8e-09 65.9 89 41.6
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 6.1e-07 58.5 134 35.1
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.8e-06 57.0 64 40.6


User provided reference genes

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