Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 5.6e-72 274.2 145 100.0
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 6.6e-41 171.0 143 65.0
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 8.7e-41 170.6 140 66.4
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 9.6e-40 167.2 139 64.7
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 1.6e-39 166.4 140 65.0
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.4e-38 163.3 139 63.3
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 1.4e-38 163.3 139 63.3
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 4.0e-38 161.8 136 63.2
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 6.9e-38 161.0 144 61.8
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 9.0e-38 160.6 135 63.0
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 1.2e-37 160.2 143 62.9
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 1.5e-37 159.8 143 60.8
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 2.0e-37 159.5 133 66.2
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 2.6e-37 159.1 146 61.6
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 7.6e-37 157.5 131 66.4
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 4.9e-36 154.8 138 60.9
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 1.1e-35 153.7 139 60.4
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.1e-35 153.7 138 60.1
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.9e-35 152.9 139 62.6
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 2.4e-35 152.5 140 62.1
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 3.2e-35 152.1 144 59.7
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 9.3e-35 150.6 136 60.3
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 1.6e-34 149.8 144 59.0
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 1.6e-34 149.8 144 59.0
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 2.1e-34 149.4 140 59.3
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 5.1e-33 144.8 132 61.4
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 6.7e-33 144.4 136 62.5
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 6.7e-33 144.4 126 62.7
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.1e-32 143.7 146 56.8
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.5e-32 143.3 138 57.2
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 3.3e-32 142.1 142 55.6
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.3e-32 142.1 142 55.6
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 3.3e-32 142.1 141 58.9
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 9.6e-32 140.6 138 55.8
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 9.6e-32 140.6 123 63.4
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 9.6e-32 140.6 132 61.4
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 2.1e-31 139.4 141 55.3
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 3.7e-31 138.7 146 54.1
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 1.1e-30 137.1 125 59.2
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 1.8e-30 136.3 123 61.0
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 3.1e-30 135.6 123 61.0
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 4.0e-30 135.2 143 54.5
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 6.9e-30 134.4 114 65.8
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 9.0e-30 134.0 117 58.1
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 1.2e-29 133.7 123 61.8
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.2e-29 133.7 131 58.0
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 2.0e-29 132.9 133 60.2
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 4.5e-29 131.7 137 57.7
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 4.5e-29 131.7 137 57.7
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 4.5e-29 131.7 114 65.8
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 5.8e-29 131.3 137 56.9
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 5.8e-29 131.3 125 58.4
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 5.8e-29 131.3 127 59.1
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 9.9e-29 130.6 132 59.1
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 9.9e-29 130.6 135 57.8
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 1.3e-28 130.2 137 56.2
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 1.7e-28 129.8 130 56.2
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 1.7e-28 129.8 132 53.8
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 2.2e-28 129.4 137 55.5
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 2.2e-28 129.4 137 55.5
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 2.9e-28 129.0 130 58.5
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 3.8e-28 128.6 137 55.5
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 3.8e-28 128.6 137 55.5
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 4.9e-28 128.3 138 55.1
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 6.4e-28 127.9 132 52.3
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 8.4e-28 127.5 123 57.7
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 1.4e-27 126.7 120 60.0
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 2.4e-27 125.9 149 52.3
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 3.2e-27 125.6 131 55.0
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 5.5e-27 124.8 136 54.4
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 7.1e-27 124.4 127 57.5
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 7.1e-27 124.4 117 59.0
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 9.3e-27 124.0 132 54.5
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 1.2e-26 123.6 128 56.2
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 2.1e-26 122.9 125 56.8
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 6.0e-26 121.3 137 54.7
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 1.0e-25 120.6 131 53.4
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 3.0e-25 119.0 139 53.2
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 5.1e-25 118.2 122 52.5
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 6.7e-25 117.9 130 50.8
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 1.1e-24 117.1 125 56.8
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 1.9e-24 116.3 119 56.3
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 2.5e-24 115.9 144 47.2
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 9.6e-24 114.0 107 59.8
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.3e-23 113.6 122 56.6
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.3e-23 113.6 122 54.1
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 2.8e-23 112.5 124 51.6
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 2.8e-23 112.5 106 58.5
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 2.8e-23 112.5 141 48.2
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 4.0e-22 108.6 105 60.0
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 9.0e-22 107.5 116 55.2
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 2.6e-21 105.9 104 57.7
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 1.7e-20 103.2 137 48.9
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 1.9e-19 99.8 122 52.5
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 4.3e-16 88.6 119 46.2
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 2.6e-13 79.3 119 42.0
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 7.7e-13 77.8 136 41.2
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 8.8e-09 64.3 47 72.3
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.5e-08 63.5 87 40.2
PRCOL_00001578 Prasinoderma coloniale HOM05D001394 ORTHO05D001237 3.1e-06 55.8 78 42.3
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 3.1e-06 55.8 78 39.7
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 6.9e-06 54.7 150 33.3
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 6.9e-06 54.7 150 33.3


User provided reference genes

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