Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 0.0e+00 1343.2 813 100.0
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 2.6e-57 228.0 836 31.6
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 3.2e-52 211.1 888 29.5
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 7.2e-52 209.9 845 30.2
TWI12G1185 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 1.2e-51 209.1 137 71.5
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 4.5e-46 190.7 852 29.5
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 9.8e-41 172.9 868 34.9
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 5.4e-39 167.2 853 28.6
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 1.3e-37 162.5 886 26.4
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.7e-37 162.2 838 28.0
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 3.3e-36 157.9 847 26.9
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 4.0e-34 151.0 847 26.6
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 6.8e-34 150.2 828 26.7
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 8.9e-34 149.8 866 27.7
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 7.5e-33 146.7 837 27.7
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 1.4e-31 142.5 852 28.4
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.4e-31 142.5 818 27.8
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 4.1e-31 141.0 900 27.4
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 1.7e-29 135.6 851 29.1
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 2.3e-29 135.2 875 25.8
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 3.0e-29 134.8 819 28.3
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 1.1e-28 132.9 841 26.9
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 1.5e-28 132.5 854 26.9
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 3.3e-28 131.3 852 26.2
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 4.3e-28 131.0 846 26.0
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 4.7e-27 127.5 358 35.2
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 1.5e-25 122.5 835 24.2
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 7.5e-25 120.2 921 31.4
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 1.3e-24 119.4 765 26.9
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 2.2e-24 118.6 844 26.4
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 2.2e-24 118.6 806 25.9
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 7.8e-22 110.2 838 25.5
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 2.5e-20 105.1 826 25.2
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.1e-18 99.8 201 37.3
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 4.0e-18 97.8 371 32.6
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 8.9e-18 96.7 867 25.0
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 4.4e-17 94.4 847 25.6
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 4.4e-17 94.4 839 25.3
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 3.7e-16 91.3 835 26.7
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 8.4e-16 90.1 195 37.9
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 2.4e-15 88.6 584 27.1
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 4.1e-15 87.8 840 24.6
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 5.4e-15 87.4 812 25.4
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 3.5e-14 84.7 129 42.6
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 4.6e-14 84.3 888 23.5
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 6.0e-14 84.0 153 39.9
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.1e-13 80.9 826 25.1
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 8.6e-13 80.1 856 24.6
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 2.5e-12 78.6 180 34.4
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 2.5e-12 78.6 813 26.3
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.5e-12 78.6 154 37.0
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 9.6e-12 76.6 854 23.4
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 2.8e-11 75.1 130 38.5
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 1.1e-10 73.2 191 38.2
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 1.4e-10 72.8 233 33.9
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.8e-10 72.4 906 23.4
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 8.9e-10 70.1 163 36.8
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 8.9e-10 70.1 156 35.9
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 1.2e-09 69.7 199 33.2
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 2.0e-09 68.9 157 35.7
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 2.0e-09 68.9 233 32.2
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 2.0e-09 68.9 243 30.9
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 2.6e-09 68.6 199 33.2
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 2.6e-09 68.6 246 31.3
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 5.8e-09 67.4 130 36.9
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 9.9e-09 66.6 108 38.9
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.7e-08 65.9 118 40.7
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 2.2e-08 65.5 279 30.5
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 2.2e-08 65.5 279 30.5
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 2.9e-08 65.1 223 29.6
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 3.8e-08 64.7 208 34.1
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 3.8e-08 64.7 208 34.1
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 3.8e-08 64.7 208 34.1
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 3.8e-08 64.7 162 34.6
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 4.9e-08 64.3 248 31.9
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 4.9e-08 64.3 243 29.2
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 6.4e-08 63.9 174 35.6
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 8.4e-08 63.5 207 31.9
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 8.4e-08 63.5 130 37.7
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 1.1e-07 63.2 153 34.0
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.4e-07 62.8 226 30.5
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 1.9e-07 62.4 222 30.6
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 3.2e-07 61.6 802 25.4
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 3.2e-07 61.6 167 32.3
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 9.3e-07 60.1 216 32.4
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 1.2e-06 59.7 250 31.2
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 1.2e-06 59.7 216 30.1
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 1.6e-06 59.3 209 27.8
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 1.6e-06 59.3 266 28.6
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 2.1e-06 58.9 246 32.1
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 2.1e-06 58.9 848 24.9
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 2.1e-06 58.9 266 28.2
Os01g0765500 Oryza sativa ssp. japonica HOM05D020829 ORTHO05D023022 2.7e-06 58.5 93 41.9
Zm00001eb370260 Zea mays HOM05D020829 ORTHO05D023022 2.7e-06 58.5 151 31.8
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 3.5e-06 58.2 222 27.5
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 3.5e-06 58.2 184 29.9
Os03g0672400 Oryza sativa ssp. japonica HOM05D058439 ORTHO05D005166 3.5e-06 58.2 143 34.3
Zm00001eb217550 Zea mays HOM05D058439 ORTHO05D005166 3.5e-06 58.2 149 33.6
Zm00001eb404480 Zea mays HOM05D020829 ORTHO05D023022 3.5e-06 58.2 116 39.7
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 4.6e-06 57.8 838 28.2
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 6.0e-06 57.4 279 28.7
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 6.0e-06 57.4 205 27.8
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 7.8e-06 57.0 270 29.6


User provided reference genes

Program Settings