Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 2.7e-198 695.3 380 100.0
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 5.9e-105 385.2 442 53.4
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 6.8e-69 265.4 354 45.5
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 1.5e-68 264.2 354 44.9
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 1.1e-66 258.1 335 45.7
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 1.8e-66 257.3 335 45.7
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 1.9e-63 247.3 414 40.6
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 2.8e-62 243.4 333 44.7
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 1.2e-57 228.0 333 41.7
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 2.5e-55 220.3 331 41.7
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 1.2e-54 218.0 338 40.2
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 2.1e-54 217.2 333 40.8
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 3.6e-54 216.5 335 40.9
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 8.0e-54 215.3 338 39.1
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 2.3e-53 213.8 338 38.8
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 1.5e-52 211.1 333 39.9
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 1.3e-51 208.0 331 39.6
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 2.2e-51 207.2 326 40.2
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 3.7e-51 206.5 332 38.3
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 4.9e-51 206.1 338 38.2
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 7.0e-50 202.2 335 38.2
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 1.2e-49 201.4 332 37.0
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 2.7e-49 200.3 331 39.6
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.6e-49 199.5 385 37.7
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.6e-49 199.5 385 37.7
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 1.3e-48 198.0 336 36.9
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 3.9e-48 196.4 334 36.8
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 8.6e-48 195.3 327 39.8
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 3.3e-47 193.4 334 38.3
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 5.6e-47 192.6 419 37.0
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 8.1e-46 188.7 404 35.4
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 3.1e-45 186.8 335 37.0
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 4.0e-45 186.4 332 36.7
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 5.2e-45 186.0 331 36.9
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 6.8e-45 185.7 347 34.9
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 9.9e-44 181.8 337 34.7
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 4.9e-43 179.5 281 40.9
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 6.4e-43 179.1 332 33.4
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 1.9e-42 177.6 333 33.6
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 1.2e-41 174.9 330 34.8
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 7.8e-41 172.2 333 37.2
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.3e-40 171.4 347 34.0
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 2.3e-40 170.6 358 32.4
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 3.3e-39 166.8 333 33.6
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 7.3e-39 165.6 331 35.3
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 9.5e-39 165.2 333 31.5
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 6.2e-38 162.5 335 35.8
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 8.1e-38 162.2 335 34.6
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 1.8e-37 161.0 348 31.0
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 1.8e-37 161.0 347 33.4
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 3.4e-36 156.8 324 32.4
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 3.4e-36 156.8 350 32.9
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 3.4e-36 156.8 340 31.8
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 5.8e-36 156.0 339 32.7
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 5.8e-36 156.0 332 33.4
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 1.3e-35 154.8 347 32.6
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 2.2e-35 154.1 328 31.4
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 6.4e-35 152.5 288 35.8
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 8.4e-35 152.1 350 32.3
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 3.5e-33 146.7 324 32.7
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 6.0e-33 146.0 291 35.1
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 1.0e-32 145.2 332 30.1
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 2.5e-31 140.6 289 33.9
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 5.6e-31 139.4 273 34.4
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 3.1e-29 133.7 352 28.7
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 2.2e-27 127.5 331 30.2
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 2.2e-27 127.5 331 30.2
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 1.4e-26 124.8 324 30.6
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 9.3e-26 122.1 341 27.6
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 1.2e-25 121.7 441 26.5
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 3.5e-25 120.2 289 30.4
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 3.9e-24 116.7 301 29.6
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 1.6e-22 111.3 424 26.4
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 6.2e-22 109.4 262 29.4
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 6.2e-22 109.4 178 36.5
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 1.2e-17 95.1 125 41.6
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.1e-13 82.0 322 25.8
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 1.2e-12 78.6 337 22.3
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 2.6e-12 77.4 138 36.2
Hund17562 Selenicereus undatus HOM05D007884 ORTHO05D009968 2.2e-11 74.3 70 48.6
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 3.8e-11 73.6 306 24.8


User provided reference genes

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