Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 3.9e-243 844.3 414 100.0
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 6.8e-131 471.5 431 57.3
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 3.7e-129 465.7 420 59.3
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 7.3e-125 451.4 415 58.6
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 2.3e-123 446.4 413 56.2
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 3.2e-120 436.0 413 55.7
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.6e-119 433.7 421 54.4
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 2.0e-119 433.3 422 55.7
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 2.7e-119 433.0 427 53.9
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 6.0e-119 431.8 427 53.6
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 1.0e-118 431.0 421 56.8
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 1.3e-118 430.6 410 56.3
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 3.0e-118 429.5 412 57.0
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 5.0e-118 428.7 416 57.0
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 2.5e-117 426.4 418 55.5
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 5.8e-114 415.2 525 46.7
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 1.7e-113 413.7 419 54.7
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 2.4e-112 409.8 430 53.5
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 2.7e-111 406.4 433 51.3
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.5e-111 406.0 414 54.8
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.0e-110 402.9 411 53.0
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.5e-109 399.8 413 52.3
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 7.3e-109 398.3 407 52.3
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 9.5e-109 397.9 425 50.6
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 3.1e-107 392.9 417 53.2
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 5.2e-107 392.1 413 51.1
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.3e-105 387.5 452 48.7
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.3e-105 387.5 417 53.0
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.1e-104 382.5 418 51.0
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 9.2e-104 381.3 434 49.8
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 3.5e-103 379.4 426 50.5
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.0e-102 377.9 426 49.5
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 3.9e-102 375.9 410 52.9
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.1e-101 374.4 412 50.7
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 1.5e-101 374.0 414 51.2
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 2.5e-101 373.2 433 49.2
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 3.3e-101 372.9 433 48.7
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 4.7e-100 369.0 431 49.0
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 4.7e-100 369.0 433 48.3
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 8.1e-100 368.2 449 47.7
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.1e-99 367.9 396 52.5
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.1e-99 367.9 429 48.5
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 1.4e-99 367.5 442 47.7
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 1.4e-99 367.5 411 51.3
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 6.9e-99 365.2 409 51.1
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.9e-99 364.8 410 49.5
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.9e-97 359.8 406 48.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.9e-97 359.8 425 49.9
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 7.1e-96 355.1 413 49.2
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.0e-94 351.3 427 49.2
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.3e-94 350.9 424 46.9
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.5e-93 347.4 415 50.8
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.9e-93 347.1 432 48.6
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 1.9e-93 347.1 450 46.7
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.6e-92 344.0 416 49.0
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 1.6e-92 344.0 417 48.4
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 2.1e-92 343.6 418 48.1
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-91 340.9 419 47.5
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 9.0e-91 338.2 412 47.8
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 2.6e-90 336.7 417 46.0
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.5e-90 335.9 414 47.6
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 5.8e-90 335.5 370 54.9
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 7.6e-90 335.1 412 47.3
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 1.7e-89 334.0 414 47.3
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.9e-89 333.2 414 47.8
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.9e-89 332.4 382 50.5
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 4.9e-89 332.4 413 47.2
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 6.4e-89 332.0 415 48.7
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 6.4e-89 332.0 426 47.4
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 8.4e-89 331.6 422 47.6
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 8.4e-89 331.6 422 47.6
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 1.4e-88 330.9 418 46.9
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 3.2e-88 329.7 420 47.9
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 7.1e-88 328.6 412 46.8
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 2.1e-87 327.0 412 46.6
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 2.7e-87 326.6 410 47.3
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 1.8e-86 323.9 410 47.1
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 5.1e-86 322.4 379 49.1
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.1e-85 321.2 412 44.9
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.9e-85 320.5 499 39.1
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 7.4e-85 318.5 430 43.7
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.1e-84 317.0 407 46.2
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 4.8e-84 315.8 417 44.8
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 1.1e-83 314.7 409 45.7
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 2.0e-82 310.5 430 44.7
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 8.7e-78 295.0 415 44.8
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 3.3e-77 293.1 425 44.0
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.6e-76 290.8 373 45.0
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 4.8e-76 289.3 317 53.3
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.4e-75 287.7 457 41.1
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 2.6e-74 283.5 417 43.9
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 3.9e-70 269.6 395 43.0
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 2.5e-69 266.9 349 44.7
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 4.3e-69 266.2 367 45.8
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 5.7e-69 265.8 349 45.6
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 8.2e-68 261.9 376 45.2
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 3.1e-67 260.0 320 46.6
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 2.2e-65 253.8 320 45.6
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.4e-61 238.8 307 45.0
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.7e-57 227.6 333 43.5
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 1.9e-56 224.2 331 43.8
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 2.3e-54 217.2 262 48.5
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 8.8e-54 215.3 325 42.5
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 1.1e-53 214.9 317 43.8
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.5e-53 214.5 378 38.6
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 2.0e-53 214.2 282 42.9
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 1.3e-52 211.5 316 41.5
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 1.8e-46 191.0 261 44.1
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 2.3e-46 190.7 306 40.5
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.1e-45 188.3 257 44.4
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 2.3e-38 164.1 466 31.8
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.5e-37 161.4 421 33.3
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 8.2e-36 155.6 400 33.0
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 1.1e-35 155.2 132 59.1
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 1.4e-35 154.8 167 52.1
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.8e-35 154.5 415 32.0
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 2.7e-34 150.6 77 88.3
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.0e-33 148.7 71 93.0
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 3.8e-33 146.7 71 90.1
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.1e-32 145.2 218 43.6
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.6e-31 141.4 71 87.3
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.0e-30 138.7 103 66.0
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 2.8e-28 130.6 163 44.8
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.5e-26 123.6 187 42.8
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 2.8e-23 114.0 201 41.8
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 2.8e-23 114.0 160 39.4
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 8.0e-23 112.5 101 59.4
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.8e-22 111.3 140 41.4
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 8.3e-20 102.4 170 35.9
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 1.1e-19 102.1 161 36.0
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.4e-19 101.7 53 84.9
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 5.4e-19 99.8 204 37.7
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 5.4e-19 99.8 114 43.0
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 2.9e-17 94.0 248 31.9
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 7.3e-16 89.4 172 37.2
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 1.0e-14 85.5 157 33.8
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 6.6e-09 66.2 65 53.8
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 8.6e-09 65.9 67 49.3


User provided reference genes

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