Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.4e-96 356.3 181 100.0
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.0e-67 260.4 181 72.4
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.8e-67 259.6 181 72.4
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 5.2e-67 258.1 184 71.2
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 5.2e-67 258.1 182 70.9
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 8.8e-67 257.3 182 70.9
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.5e-66 256.5 182 72.0
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.0e-66 256.1 184 73.4
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 7.4e-66 254.2 182 72.0
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 9.7e-66 253.8 182 70.3
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.3e-65 253.4 180 71.7
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 2.2e-65 252.7 185 69.7
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 3.7e-65 251.9 181 68.5
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.7e-65 251.9 181 71.3
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.8e-65 251.5 182 70.9
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 6.3e-65 251.1 182 71.4
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.3e-65 251.1 182 71.4
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 6.3e-65 251.1 182 69.2
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.1e-64 250.4 181 70.2
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.8e-64 249.6 183 71.6
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 5.3e-64 248.1 183 68.9
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 5.3e-64 248.1 181 70.7
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 9.1e-64 247.3 182 70.3
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.0e-63 246.1 181 68.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 3.5e-63 245.4 182 70.9
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 7.7e-63 244.2 183 69.4
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.7e-62 243.0 182 67.6
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 3.8e-62 241.9 182 67.6
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 5.0e-62 241.5 181 65.7
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.5e-61 240.0 182 66.5
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.9e-61 239.6 182 66.5
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.9e-61 239.6 181 66.9
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.5e-61 239.2 180 66.7
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 2.5e-61 239.2 167 71.9
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 4.2e-61 238.4 183 66.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.5e-61 238.0 180 66.1
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 7.2e-61 237.7 181 64.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 9.4e-61 237.3 181 68.0
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.1e-60 236.1 181 64.6
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.7e-60 235.7 181 64.6
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.7e-60 235.7 186 67.2
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.6e-60 235.3 181 64.6
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.6e-60 235.3 181 64.6
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 6.1e-60 234.6 181 66.3
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 8.0e-60 234.2 181 64.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 1.0e-59 233.8 181 66.3
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.0e-59 233.8 181 64.6
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.4e-59 233.4 183 66.7
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 4.0e-59 231.9 182 65.9
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.2e-59 231.5 181 62.4
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 6.7e-59 231.1 182 66.5
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.5e-58 229.9 181 64.6
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.5e-58 229.9 181 65.7
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.5e-58 229.9 181 65.7
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 2.0e-58 229.6 184 63.6
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 3.3e-58 228.8 190 64.7
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 7.5e-58 227.6 185 64.9
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 2.8e-57 225.7 158 70.3
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 3.7e-57 225.3 184 64.7
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.8e-57 224.9 180 63.3
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 6.3e-57 224.6 182 64.3
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.1e-56 223.8 181 63.0
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.8e-56 223.0 180 62.8
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 2.4e-56 222.6 186 62.9
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 3.1e-56 222.2 186 61.8
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 3.1e-56 222.2 182 63.2
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.6e-55 219.9 182 61.0
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 1.6e-55 219.9 157 68.2
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 3.5e-55 218.8 185 62.2
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 5.9e-55 218.0 152 70.4
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 7.7e-55 217.6 145 73.1
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.2e-54 216.1 184 63.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 2.9e-54 215.7 172 64.0
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 3.8e-54 215.3 183 62.3
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 4.2e-53 211.8 180 59.4
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 5.5e-53 211.5 181 60.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 9.4e-53 210.7 116 83.6
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 9.4e-53 210.7 184 58.7
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.6e-52 209.9 146 70.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 2.1e-52 209.5 200 59.0
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 2.7e-52 209.1 153 63.4
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 2.7e-52 209.1 185 60.0
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.6e-52 208.8 183 56.8
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 8.0e-52 207.6 158 63.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 1.0e-51 207.2 184 58.7
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.0e-51 207.2 115 82.6
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 1.8e-51 206.5 116 82.8
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 1.5e-50 203.4 187 57.8
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.0e-50 203.0 118 79.7
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.6e-50 202.6 156 61.5
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 2.6e-50 202.6 180 57.8
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 7.5e-50 201.1 184 55.4
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 7.5e-50 201.1 176 62.5
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.3e-49 200.3 185 54.6
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.7e-49 199.9 169 58.0
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.7e-49 199.9 182 57.1
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 3.7e-49 198.7 182 54.4
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 3.7e-49 198.7 169 57.4
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 3.7e-49 198.7 155 60.6
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 4.8e-49 198.4 164 59.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 8.3e-49 197.6 182 55.5
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.1e-48 197.2 182 59.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.8e-48 196.4 155 59.4
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.8e-48 196.4 186 56.5
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.4e-48 196.1 182 55.5
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 3.1e-48 195.7 114 77.2
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 5.4e-48 194.9 188 56.4
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 7.0e-48 194.5 115 76.5
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 2.0e-47 193.0 185 54.1
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 4.5e-47 191.8 174 55.7
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 5.0e-46 188.3 115 74.8
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 6.1e-44 181.4 181 55.8
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.7e-41 172.2 181 52.5
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 1.2e-39 167.2 111 67.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.5e-39 165.6 117 63.2
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.7e-38 163.3 115 65.2
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.9e-38 162.2 111 64.0
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.8e-35 153.3 110 69.1
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 4.0e-35 152.1 110 60.9
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.0e-34 149.8 109 62.4
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.6e-34 149.4 107 62.6
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.9e-32 143.3 107 57.9
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 9.2e-24 114.4 102 63.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 8.6e-22 107.8 173 42.8
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 4.7e-20 102.1 59 74.6
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 4.7e-20 102.1 59 74.6
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.6e-18 96.3 62 72.6
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.1e-15 86.7 108 50.9
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 2.7e-15 86.3 49 79.6


User provided reference genes

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