Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 6.9e-67 257.3 141 100.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.8e-43 179.5 138 75.4
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.5e-42 176.4 137 74.5
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 2.2e-41 172.6 140 70.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.9e-41 172.2 138 73.9
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 6.5e-41 171.0 121 81.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 6.5e-41 171.0 121 81.0
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.9e-40 169.5 129 72.9
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 3.2e-40 168.7 133 72.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 7.1e-40 167.5 139 69.8
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.5e-37 159.8 133 69.9
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.5e-37 159.8 136 67.6
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.9e-37 159.5 128 72.7
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 5.7e-37 157.9 114 76.3
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 9.6e-37 157.1 110 78.2
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.3e-36 156.8 134 67.2
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.3e-36 156.8 114 77.2
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.1e-36 156.0 115 75.7
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.1e-36 156.0 133 69.2
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 8.2e-36 154.1 125 70.4
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 8.2e-36 154.1 114 73.7
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 5.3e-35 151.4 141 63.1
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 9.0e-35 150.6 125 68.0
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.5e-34 149.8 129 70.5
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.6e-34 149.1 131 67.9
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 2.6e-34 149.1 156 59.0
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.5e-34 148.3 129 68.2
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 5.9e-34 147.9 128 69.5
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 5.9e-34 147.9 138 63.8
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.6e-34 147.5 131 67.2
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 7.6e-34 147.5 128 67.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 1.3e-33 146.7 120 70.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-33 146.7 123 67.5
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.3e-33 146.7 123 67.5
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.3e-33 146.7 135 65.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.3e-33 146.7 138 63.8
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 2.9e-33 145.6 123 66.7
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 3.8e-33 145.2 116 69.8
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 3.8e-33 145.2 108 72.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 5.0e-33 144.8 115 73.9
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 6.5e-33 144.4 110 70.9
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.1e-32 143.7 118 70.3
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-32 143.3 134 65.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.5e-32 142.5 111 71.2
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 3.2e-32 142.1 108 74.1
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 5.5e-32 141.4 121 66.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 5.5e-32 141.4 123 68.3
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 9.3e-32 140.6 123 68.3
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.2e-31 140.2 123 69.9
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.6e-31 139.8 165 54.5
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 6.1e-31 137.9 135 60.7
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.3e-30 136.7 117 65.8
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.3e-30 136.7 120 67.5
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.3e-30 136.0 139 58.3
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 8.7e-30 134.0 135 60.0
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.9e-29 132.9 109 67.9
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.5e-29 132.5 156 55.8
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.3e-29 132.1 126 61.1
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.3e-29 131.7 126 60.3
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.3e-28 130.2 98 75.5
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.6e-28 129.8 113 64.6
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.2e-28 129.4 115 66.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 6.3e-28 127.9 112 64.3
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.4e-27 126.7 113 63.7
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 2.4e-27 125.9 112 66.1
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 2.4e-27 125.9 112 66.1
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 3.1e-27 125.6 112 66.1
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 3.1e-27 125.6 105 68.6
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 3.1e-27 125.6 127 61.4
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 4.1e-27 125.2 120 61.7
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 5.3e-27 124.8 112 65.2
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 5.3e-27 124.8 112 65.2
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 5.3e-27 124.8 112 65.2
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 6.9e-27 124.4 112 64.3
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 6.9e-27 124.4 117 60.7
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 9.1e-27 124.0 120 59.2
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 1.5e-26 123.2 108 65.7
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.0e-26 122.9 117 58.1
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 1.7e-25 119.8 95 71.6
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.9e-25 119.0 113 61.1
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 8.5e-25 117.5 114 60.5
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 1.1e-24 117.1 149 51.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.9e-24 116.3 115 56.5
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 2.3e-22 109.4 96 64.6
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.0e-22 109.0 105 59.0
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 3.9e-22 108.6 88 65.9
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 5.1e-22 108.2 95 63.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.1e-21 107.1 90 65.6
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.5e-21 106.7 105 58.1
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 2.6e-21 105.9 95 66.3
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.7e-20 103.2 98 63.3
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.8e-20 102.4 80 73.8
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 8.2e-20 100.9 78 69.2
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 1.8e-19 99.8 85 64.7
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.1e-19 99.0 75 73.3
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.5e-18 96.7 126 50.8
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.7e-18 94.4 78 62.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.9e-17 92.4 83 62.7
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.9e-16 89.7 75 65.3
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.2e-15 87.0 80 60.0
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.6e-15 86.7 71 63.4
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 3.0e-14 82.4 57 78.9
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 9.7e-13 77.4 122 41.8
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 9.7e-13 77.4 77 62.3
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 3.7e-12 75.5 59 66.1
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 6.3e-12 74.7 111 51.4
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 6.3e-12 74.7 111 51.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 8.2e-12 74.3 42 88.1
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 1.6e-10 70.1 99 41.4
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.0e-10 69.7 53 67.9
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.0e-10 69.7 47 74.5
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 1.6e-07 60.1 52 65.4
CBR_g6348 Chara braunii HOM05D006869 ORTHO05D008641 3.0e-06 55.8 86 43.0
CAN.G982.11 Capsicum annuum HOM05D006869 ORTHO05D008641 5.2e-06 55.1 44 68.2


User provided reference genes

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