Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI15G0344 Tripterygium wilfordii HOM05D007891 ORTHO05D009992 1.6e-22 108.6 58 100.0
Manes.01G000186 Manihot esculenta HOM05D007891 ORTHO05D009992 1.1e-15 85.9 58 79.3
COL.COLO4_10847 Corchorus olitorius HOM05D007891 ORTHO05D009992 1.4e-13 79.0 57 75.4
Thecc.03G215400 Theobroma cacao HOM05D007891 ORTHO05D009992 1.4e-13 79.0 57 73.7
Potri.011G149400 Populus trichocarpa HOM05D007891 ORTHO05D009992 2.3e-13 78.2 57 73.7
RcHm_v2.0_Chr7g0187861 Rosa chinensis HOM05D007891 ORTHO05D009992 8.9e-13 76.3 55 72.7
Cfa011885 Carpinus fangiana HOM05D007891 ORTHO05D009992 1.2e-12 75.9 55 74.5
MD00G1096700 Malus domestica HOM05D007891 ORTHO05D009992 1.5e-12 75.5 64 67.2
Duzib205G0121 Durio zibethinus HOM05D007891 ORTHO05D009992 4.4e-12 73.9 54 72.2
QL12p003189 Quercus lobata HOM05D007891 ORTHO05D009992 4.4e-12 73.9 57 71.9
Prupe.5G135300 Prunus persica HOM05D007891 ORTHO05D009992 5.8e-12 73.6 62 69.4
Ciclev10023227m.g Citrus clementina HOM05D007891 ORTHO05D009992 7.5e-12 73.2 66 63.6
MD06G1124700 Malus domestica HOM05D007891 ORTHO05D009992 1.3e-11 72.4 64 64.1
PGR042G1189 Punica granatum HOM05D007891 ORTHO05D009992 1.7e-11 72.0 50 76.0
Migut.A01060 Erythranthe guttata HOM05D007891 ORTHO05D009992 2.2e-11 71.6 51 76.5
Gohir.A02G095100 Gossypium hirsutum HOM05D007891 ORTHO05D009992 2.2e-11 71.6 57 71.9
ATR0579G034 Amborella trichopoda HOM05D007891 ORTHO05D009992 4.9e-11 70.5 53 71.7
Gorai.003G073400 Gossypium raimondii HOM05D007891 ORTHO05D009992 4.9e-11 70.5 57 70.2
Gohir.D03G088400 Gossypium hirsutum HOM05D007891 ORTHO05D009992 8.3e-11 69.7 52 71.2
Zm00001eb072990 Zea mays HOM05D007891 ORTHO05D009992 8.3e-11 69.7 51 74.5
CANSAT21G1412 Cannabis sativa HOM05D007891 ORTHO05D009992 1.1e-10 69.3 50 72.0
Nn3g18767 Nelumbo nucifera HOM05D007891 ORTHO05D009992 1.1e-10 69.3 50 74.0
Zm00001eb250770 Zea mays HOM05D007891 ORTHO05D009992 1.1e-10 69.3 51 74.5
Gohir.A08G108600 Gossypium hirsutum HOM05D007891 ORTHO05D009992 3.2e-10 67.8 57 63.2
Ca_00459_v3 Cicer arietinum L. HOM05D007891 ORTHO05D009992 4.1e-10 67.4 50 70.0
Gorai.004G128000 Gossypium raimondii HOM05D007891 ORTHO05D009992 4.1e-10 67.4 57 64.9
Os04g0581700 Oryza sativa ssp. japonica HOM05D007891 ORTHO05D009992 4.1e-10 67.4 51 72.5
SalBow6G2331 Salvia bowleyana HOM05D007891 ORTHO05D009992 4.1e-10 67.4 45 77.8
Gohir.A09G187300 Gossypium hirsutum HOM05D007891 ORTHO05D009992 7.1e-10 66.6 52 67.3
arahy.Tifrunner.gnm1.ann1.GMZ6HP Arachis hypogaea HOM05D007891 ORTHO05D009992 1.2e-09 65.9 50 72.0
Haze_09219 Corylus avellana HOM05D000010 ORTHO05D000063 1.2e-09 65.9 45 73.3
Eucgr.L00345 Eucalyptus grandis HOM05D007891 ORTHO05D009992 1.2e-09 65.9 49 65.3
Gohir.D08G121300 Gossypium hirsutum HOM05D007891 ORTHO05D009992 2.1e-09 65.1 57 63.2
Nn1g05266 Nelumbo nucifera HOM05D007891 ORTHO05D009992 2.7e-09 64.7 49 73.5
Gohir.D09G182100 Gossypium hirsutum HOM05D007891 ORTHO05D009992 3.5e-09 64.3 52 65.4
Gorai.006G204200 Gossypium raimondii HOM05D007891 ORTHO05D009992 3.5e-09 64.3 52 65.4
Medtr2g016650 Medicago truncatula HOM05D007891 ORTHO05D009992 3.5e-09 64.3 50 66.0
Lj6g0010842 Lotus japonicus HOM05D007891 ORTHO05D009992 4.6e-09 63.9 56 62.5
Os07g0469200 Oryza sativa ssp. japonica HOM05D007891 ORTHO05D009992 4.6e-09 63.9 53 67.9
Phvul.006G173900 Phaseolus vulgaris HOM05D007891 ORTHO05D009992 4.6e-09 63.9 50 66.0
TPR.G27295 Trifolium pratense HOM05D007891 ORTHO05D009992 7.8e-09 63.2 50 66.0
PSO063G6751 Papaver somniferum HOM05D007891 ORTHO05D009992 1.3e-08 62.4 59 61.0
Lalb_Chr20g0117551 Lupinus albus HOM05D007891 ORTHO05D009992 2.3e-08 61.6 50 66.0
ClCG01G001300 Citrullus lanatus HOM05D007891 ORTHO05D009992 5.1e-08 60.5 49 63.3
THA.LOC104806463 Tarenaya hassleriana HOM05D007891 ORTHO05D009992 5.1e-08 60.5 50 62.0
CSS0018813 Camellia sinensis var. sinensis HOM05D007891 ORTHO05D009992 1.5e-07 58.9 51 62.7
A09p33310 Brassica napus HOM05D007891 ORTHO05D009992 1.9e-07 58.5 55 58.2
BraA09t38876Z Brassica rapa HOM05D007891 ORTHO05D009992 1.9e-07 58.5 55 58.2
HPP92_022259 Vanilla planifolia HOM05D007891 ORTHO05D009992 2.5e-07 58.2 47 68.1
CsaV3_5G001430 Cucumis sativus L. HOM05D007891 ORTHO05D009992 3.3e-07 57.8 52 57.7
Carub.0001s3132 Capsella rubella HOM05D007891 ORTHO05D009992 1.2e-06 55.8 54 57.4
Potri.001G452500 Populus trichocarpa HOM05D007891 ORTHO05D009992 1.2e-06 55.8 39 69.2
Zm00001eb096350 Zea mays HOM05D007891 ORTHO05D009992 1.2e-06 55.8 51 62.7
Zm00001eb096380 Zea mays HOM05D007891 ORTHO05D009992 1.2e-06 55.8 51 62.7
C05p32460 Brassica napus HOM05D007891 ORTHO05D009992 1.6e-06 55.5 55 58.2
BolC5t31978H Brassica oleracea HOM05D007891 ORTHO05D009992 1.6e-06 55.5 55 58.2
BcaB03g13704 Brassica carinata HOM05D007891 ORTHO05D009992 2.1e-06 55.1 59 52.5
Actinidia22232 Actinidia chinensis HOM05D007891 ORTHO05D009992 2.8e-06 54.7 58 58.6
BcaC05g27811 Brassica carinata HOM05D007891 ORTHO05D009992 2.8e-06 54.7 58 53.4
C05p38140 Brassica napus HOM05D007891 ORTHO05D009992 2.8e-06 54.7 58 53.4
Zm00001eb096410 Zea mays HOM05D007891 ORTHO05D009992 2.8e-06 54.7 51 60.8
Zm00001eb096420 Zea mays HOM05D007891 ORTHO05D009992 2.8e-06 54.7 51 60.8
A05p24400 Brassica napus HOM05D007891 ORTHO05D009992 3.6e-06 54.3 59 52.5
BraA05t21332Z Brassica rapa HOM05D007891 ORTHO05D009992 3.6e-06 54.3 59 52.5
Thhalv10009221m.g Eutrema salsugineum HOM05D007891 ORTHO05D009992 3.6e-06 54.3 47 57.4
Zm00001eb096470 Zea mays HOM05D007891 ORTHO05D009992 3.6e-06 54.3 51 60.8
AL1G47370 Arabidopsis lyrata HOM05D007891 ORTHO05D009992 4.7e-06 53.9 47 55.3
C04p42520 Brassica napus HOM05D007891 ORTHO05D009992 4.7e-06 53.9 59 52.5
Sed0006175 Sechium edule HOM05D007891 ORTHO05D009992 4.7e-06 53.9 44 61.4
AT1G33055 Arabidopsis thaliana HOM05D007891 ORTHO05D009992 6.2e-06 53.5 47 55.3


User provided reference genes

Program Settings