Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.6e-46 188.3 93 100.0
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.6e-24 115.9 77 80.5
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.0e-18 96.7 77 67.5
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.9e-18 94.7 78 65.4
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.1e-17 93.2 69 71.0
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.1e-17 93.2 69 71.0
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.5e-17 92.8 70 70.0
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 1.5e-17 92.8 88 55.7
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.9e-17 92.4 76 65.8
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 1.9e-17 92.4 71 70.4
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.3e-17 91.7 78 64.1
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 4.3e-17 91.3 74 66.2
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 4.3e-17 91.3 76 64.5
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 5.6e-17 90.9 81 61.7
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 7.3e-17 90.5 77 66.2
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 9.6e-17 90.1 74 64.9
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 1.6e-16 89.4 73 64.4
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.6e-16 89.4 81 63.0
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 3.6e-16 88.2 79 65.8
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 3.6e-16 88.2 83 63.9
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 4.7e-16 87.8 100 54.0
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 1.4e-15 86.3 78 65.4
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 1.8e-15 85.9 90 53.3
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 3.1e-15 85.1 81 63.0
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 5.2e-15 84.3 70 64.3
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 6.8e-15 84.0 58 77.6
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 6.8e-15 84.0 58 77.6
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.9e-15 83.6 60 75.0
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.9e-15 83.6 60 75.0
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 1.2e-14 83.2 81 61.7
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.2e-14 83.2 48 81.2
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 1.2e-14 83.2 75 58.7
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 1.2e-14 83.2 75 58.7
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 1.2e-14 83.2 85 56.5
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.5e-14 82.8 45 88.9
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 2.0e-14 82.4 59 72.9
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 2.0e-14 82.4 60 73.3
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 3.4e-14 81.6 81 53.1
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 5.8e-14 80.9 92 54.3
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 5.8e-14 80.9 94 51.1
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 5.8e-14 80.9 71 64.8
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 7.6e-14 80.5 77 57.1
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 7.6e-14 80.5 44 88.6
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.6e-14 80.5 44 88.6
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.6e-14 80.5 44 88.6
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 7.6e-14 80.5 94 51.1
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 9.9e-14 80.1 53 75.5
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 9.9e-14 80.1 87 56.3
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 1.3e-13 79.7 59 66.1
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 3.8e-13 78.2 49 81.6
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 4.9e-13 77.8 66 60.6
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 4.9e-13 77.8 63 66.7
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 4.9e-13 77.8 44 79.5
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 8.4e-13 77.0 52 73.1
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 8.4e-13 77.0 58 69.0
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 8.4e-13 77.0 41 90.2
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 1.1e-12 76.6 42 85.7
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.1e-12 76.6 65 64.6
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.1e-12 76.6 59 67.8
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 1.4e-12 76.3 66 63.6
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 1.4e-12 76.3 43 81.4
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 1.4e-12 76.3 42 88.1
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 1.9e-12 75.9 54 68.5
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 2.4e-12 75.5 58 69.0
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 3.2e-12 75.1 71 56.3
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 4.2e-12 74.7 45 80.0
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 4.2e-12 74.7 45 80.0
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 4.2e-12 74.7 45 80.0
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 5.4e-12 74.3 35 94.3
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 7.1e-12 73.9 46 78.3
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 7.1e-12 73.9 62 66.1
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 9.3e-12 73.6 46 73.9
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 9.3e-12 73.6 46 73.9
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 1.2e-11 73.2 48 70.8
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 1.6e-11 72.8 33 97.0
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.1e-11 72.4 46 73.9
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 2.7e-11 72.0 42 83.3
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 2.7e-11 72.0 45 77.8
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 2.7e-11 72.0 45 75.6
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 3.5e-11 71.6 46 73.9
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 6.0e-11 70.9 98 44.9
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 6.0e-11 70.9 44 75.0
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 7.8e-11 70.5 45 73.3
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.0e-10 70.1 44 75.0
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 2.3e-10 68.9 61 62.3
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 6.6e-10 67.4 37 75.7
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 6.6e-10 67.4 104 43.3
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 6.6e-10 67.4 35 80.0
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 6.6e-10 67.4 41 82.9
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 8.7e-10 67.0 51 62.7
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.1e-09 66.6 47 70.2
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 1.5e-09 66.2 36 80.6
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 7.3e-09 63.9 64 56.2
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 7.3e-09 63.9 64 56.2
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 7.3e-09 63.9 33 81.8
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 9.6e-09 63.5 45 71.1
Pp3c16_16780 Physcomitrium patens HOM05D006246 ORTHO05D007932 1.3e-08 63.2 69 55.1
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 6.2e-08 60.8 90 44.4
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 1.1e-07 60.1 55 56.4
C04p19050 Brassica napus HOM05D006246 ORTHO05D007932 3.1e-07 58.5 52 63.5
A04p24110 Brassica napus HOM05D006246 ORTHO05D007932 4.0e-07 58.2 54 59.3
C04p60820 Brassica napus HOM05D006246 ORTHO05D007932 4.0e-07 58.2 54 59.3
BraA04t17931Z Brassica rapa HOM05D006246 ORTHO05D007932 4.0e-07 58.2 54 59.3
BraA05t20360Z Brassica rapa HOM05D006246 ORTHO05D007932 4.0e-07 58.2 54 61.1
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 4.0e-07 58.2 39 71.8
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 9.0e-07 57.0 59 55.9
EL10Ac1g00152 Beta vulgaris HOM05D006246 ORTHO05D007932 1.2e-06 56.6 58 53.4
BcaB06g28444 Brassica carinata HOM05D006246 ORTHO05D007932 2.0e-06 55.8 53 58.5
AL4G26530 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 2.6e-06 55.5 58 55.2
Nn5g27268 Nelumbo nucifera HOM05D006246 ORTHO05D007932 5.8e-06 54.3 63 54.0


User provided reference genes

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