Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.0e-250 868.6 427 100.0
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.0e-177 627.1 396 75.3
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.3e-177 626.7 420 72.4
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.7e-177 626.3 396 75.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.4e-176 623.2 387 75.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.3e-174 616.7 419 72.3
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.8e-174 616.3 421 71.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.0e-174 615.5 421 71.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.9e-173 612.8 418 72.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 9.7e-173 610.5 424 70.8
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.7e-172 608.6 380 75.3
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 3.4e-170 602.1 396 71.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 3.4e-170 602.1 396 73.0
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.7e-170 600.9 368 76.1
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.6e-167 592.0 376 76.3
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.9e-166 588.6 368 76.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 6.7e-166 587.8 429 68.1
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.5e-165 586.6 434 67.3
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 4.3e-165 585.1 361 76.2
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.8e-164 582.4 389 71.5
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 4.8e-164 581.6 414 69.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.8e-164 581.6 364 75.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 8.2e-164 580.9 423 68.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.4e-163 579.3 405 69.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 4.1e-163 578.6 381 72.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.5e-162 576.6 363 75.2
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.0e-162 576.2 360 75.3
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 3.4e-162 575.5 363 75.5
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.3e-161 573.5 384 73.4
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.9e-161 572.4 363 73.8
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.9e-161 572.4 364 74.5
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 5.0e-161 571.6 363 74.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.4e-160 570.1 366 74.3
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.2e-159 567.0 368 72.0
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.6e-159 566.6 363 73.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.6e-159 566.6 381 70.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.1e-159 566.2 363 73.3
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 3.6e-159 565.5 382 72.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 6.1e-159 564.7 384 70.6
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.4e-158 563.5 381 70.9
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.3e-158 562.8 388 69.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.1e-158 561.6 371 70.6
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.1e-157 560.5 409 67.0
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.0e-157 559.7 375 70.1
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.6e-157 559.3 362 71.5
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 2.6e-157 559.3 375 70.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.3e-157 558.9 371 70.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.3e-156 557.0 370 70.8
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.7e-156 556.6 364 71.2
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 6.3e-156 554.7 363 72.2
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 8.2e-156 554.3 398 67.8
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.1e-155 553.9 368 70.7
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 9.1e-155 550.8 380 69.7
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 4.5e-154 548.5 347 72.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 5.9e-154 548.1 386 67.6
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.1e-152 543.9 373 69.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.4e-152 543.5 417 63.8
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.2e-151 540.4 365 69.9
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 3.6e-151 538.9 414 65.7
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.4e-150 537.0 417 62.6
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.2e-150 535.0 413 65.9
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 6.7e-150 534.6 369 69.4
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 6.7e-150 534.6 340 73.8
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 3.3e-149 532.3 379 66.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 7.4e-149 531.2 384 66.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 7.4e-149 531.2 395 65.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.8e-148 529.3 376 69.9
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.4e-147 526.9 368 67.7
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 3.5e-146 522.3 353 70.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.5e-146 521.9 424 61.8
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.7e-143 512.7 389 66.1
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.7e-143 511.9 373 68.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 6.7e-142 508.1 364 67.9
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.5e-141 506.9 350 68.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.6e-141 506.1 362 66.6
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 2.8e-140 502.7 405 60.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.7e-140 502.3 360 67.2
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 4.1e-139 498.8 380 62.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.2e-137 493.0 513 52.0
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.1e-131 474.2 352 64.8
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.0e-129 467.6 374 61.5
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.4e-123 447.2 291 72.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 5.0e-121 438.7 363 56.2
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 9.5e-120 434.5 361 57.9
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 4.4e-117 425.6 434 53.0
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.5e-114 416.0 392 54.3
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.4e-109 399.4 374 57.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.0e-105 387.9 347 54.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 5.1e-105 385.6 368 54.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.1e-104 384.4 380 49.2
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 8.1e-103 378.3 255 70.2
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.1e-102 376.3 262 68.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-98 363.2 347 51.3
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.3e-87 327.8 295 56.6
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.5e-82 309.7 333 50.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.1e-72 278.1 359 45.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.1e-67 258.8 389 38.6
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.8e-54 217.6 128 77.3
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.9e-51 207.6 131 72.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.9e-42 175.6 188 49.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.9e-41 173.3 133 64.7
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.8e-39 166.4 108 71.3
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 2.2e-28 131.0 111 57.7
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 5.2e-25 119.8 125 50.4
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.4e-24 117.1 79 63.3
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 8.3e-23 112.5 134 48.5
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.2e-21 108.6 168 37.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.0e-20 105.5 375 26.1
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 5.5e-19 99.8 60 73.3
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 9.4e-19 99.0 99 52.5
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 6.1e-18 96.3 78 61.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.3e-17 94.4 224 32.1
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.8e-17 92.8 80 57.5
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.3e-15 88.6 179 34.1
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.4e-14 84.3 116 45.7
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.5e-11 75.1 52 69.2


User provided reference genes

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