Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 6.4e-74 280.8 157 100.0
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 6.7e-55 217.6 152 82.2
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.1e-54 216.9 158 70.3
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.5e-54 216.5 157 68.2
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.3e-54 215.3 155 73.5
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 4.3e-54 214.9 157 75.2
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 7.4e-54 214.2 156 69.2
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 3.7e-53 211.8 157 68.8
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.1e-52 210.3 157 75.2
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 2.4e-52 209.1 158 67.7
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 2.4e-52 209.1 153 70.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 3.1e-52 208.8 158 68.4
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 5.3e-52 208.0 156 67.9
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.2e-51 206.8 157 68.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 1.5e-51 206.5 158 77.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 4.5e-51 204.9 126 84.1
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.0e-50 203.8 153 77.1
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 5.0e-50 201.4 156 64.7
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 5.0e-50 201.4 128 76.6
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 6.5e-50 201.1 150 68.0
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 8.5e-50 200.7 153 76.5
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.1e-49 200.3 157 61.1
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 2.5e-49 199.1 158 66.5
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.2e-49 198.7 155 67.7
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.2e-49 198.7 153 77.1
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 3.2e-49 198.7 157 64.3
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 4.2e-49 198.4 155 64.5
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 5.5e-49 198.0 128 75.0
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 9.4e-49 197.2 126 76.2
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.2e-48 196.8 149 67.1
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.1e-48 196.1 155 63.9
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 3.6e-48 195.3 154 63.0
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 1.4e-47 193.4 158 62.7
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.3e-47 192.6 155 60.6
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.3e-47 192.6 155 60.6
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 3.0e-47 192.2 150 74.0
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 3.9e-47 191.8 133 75.2
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 3.9e-47 191.8 157 67.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 3.9e-47 191.8 131 72.5
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 6.7e-47 191.0 153 64.7
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 6.7e-47 191.0 155 60.6
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 6.7e-47 191.0 144 66.7
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 6.7e-47 191.0 154 66.9
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 6.7e-47 191.0 149 65.1
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 6.7e-47 191.0 128 74.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 6.7e-47 191.0 155 61.3
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 8.8e-47 190.7 152 62.5
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 8.8e-47 190.7 155 60.0
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 1.5e-46 189.9 153 62.1
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.5e-46 189.9 152 61.8
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.0e-46 189.5 126 73.8
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.6e-46 189.1 156 69.2
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.6e-46 189.1 153 67.3
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 2.6e-46 189.1 155 61.3
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 3.3e-46 188.7 131 73.3
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 4.4e-46 188.3 153 60.8
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 7.4e-46 187.6 157 59.2
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 9.7e-46 187.2 158 63.3
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 9.7e-46 187.2 128 75.8
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.3e-45 186.8 154 61.7
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.3e-45 186.8 133 69.2
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.7e-45 186.4 154 63.6
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.7e-45 186.4 123 72.4
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.2e-45 186.0 154 61.7
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 2.2e-45 186.0 154 61.7
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.2e-45 186.0 154 61.7
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.2e-45 186.0 127 68.5
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.8e-45 185.7 125 75.2
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.8e-45 185.7 124 74.2
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 6.3e-45 184.5 156 60.9
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 6.3e-45 184.5 151 61.6
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 6.3e-45 184.5 125 72.8
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 8.2e-45 184.1 125 71.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.1e-44 183.7 157 57.3
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.4e-44 183.3 124 73.4
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 1.8e-44 183.0 153 60.8
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 4.1e-44 181.8 158 61.4
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 2.0e-43 179.5 123 69.1
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.6e-43 179.1 127 66.9
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 2.6e-43 179.1 124 70.2
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 3.4e-43 178.7 155 65.2
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.3e-42 176.8 133 72.9
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 5.0e-42 174.9 129 67.4
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 8.5e-42 174.1 153 67.3
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.1e-41 173.7 122 72.1
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.9e-41 172.9 149 69.1
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.6e-40 169.9 126 69.8
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 2.7e-40 169.1 119 71.4
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 7.9e-40 167.5 154 56.5
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 7.9e-40 167.5 146 69.2
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.0e-39 167.2 158 61.4
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 1.0e-39 167.2 147 57.8
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 2.3e-39 166.0 124 66.1
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.0e-39 165.6 145 60.0
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 3.9e-39 165.2 158 56.3
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 6.7e-39 164.5 158 62.0
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 8.8e-39 164.1 127 66.9
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 8.8e-39 164.1 125 64.8
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.5e-38 163.3 145 60.0
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.5e-38 163.3 155 55.5
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.8e-37 159.1 121 65.3
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 9.1e-36 154.1 127 59.8
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 2.2e-34 149.4 135 57.0
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 2.9e-34 149.1 129 56.6
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.1e-33 147.1 134 58.2
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.1e-32 142.9 155 49.7
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.7e-32 142.5 155 49.7
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.0e-30 136.3 126 53.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 3.1e-28 129.0 89 71.9
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.0e-26 124.0 123 46.3
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.9e-25 119.8 138 44.9
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 7.2e-25 117.9 103 58.3
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 7.5e-22 107.8 123 43.9
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 5.4e-20 101.7 142 46.5
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.2e-19 100.5 118 44.1
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.6e-19 100.1 149 40.3
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 2.0e-19 99.8 88 55.7
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 2.7e-19 99.4 87 62.1
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.8e-18 95.5 80 57.5
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.2e-16 90.5 81 50.6
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 6.8e-15 84.7 78 47.4
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 2.6e-14 82.8 119 43.7
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 3.3e-09 65.9 84 51.2
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 3.0e-07 59.3 50 54.0


User provided reference genes

Program Settings