Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0271 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 3.1e-156 555.1 279 100.0
TWI14G1129 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 3.1e-156 555.1 279 100.0
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.1e-135 486.9 266 92.5
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 2.3e-122 442.6 266 84.2
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 2.2e-101 372.9 267 69.7
QL04p040018 Quercus lobata HOM05D004478 ORTHO05D007440 1.3e-98 363.6 268 68.7
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 3.9e-98 362.1 267 68.2
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 8.7e-98 360.9 272 68.8
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 2.5e-97 359.4 266 68.0
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 2.1e-96 356.3 272 66.2
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 2.8e-96 355.9 272 66.2
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 3.7e-96 355.5 272 66.5
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 4.8e-96 355.1 266 67.7
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 3.1e-95 352.4 267 67.0
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 9.0e-95 350.9 272 65.1
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 1.5e-94 350.1 266 67.3
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 1.5e-94 350.1 272 65.4
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 1.5e-94 350.1 267 66.7
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 1.5e-94 350.1 272 66.2
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 4.5e-94 348.6 266 67.7
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 7.6e-94 347.8 267 66.7
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 2.2e-93 346.3 267 65.5
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 2.2e-93 346.3 267 66.3
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 6.5e-93 344.7 275 63.6
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 1.4e-92 343.6 267 63.3
Haze_02653 Corylus avellana HOM05D004478 ORTHO05D007440 4.2e-92 342.0 267 64.8
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 4.2e-92 342.0 267 64.8
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 5.5e-92 341.7 267 65.2
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 2.7e-91 339.3 267 64.8
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 7.9e-91 337.8 267 65.9
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 3.9e-90 335.5 269 62.5
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 5.1e-90 335.1 273 61.9
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 5.1e-90 335.1 267 61.8
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 5.1e-90 335.1 267 64.8
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 6.7e-90 334.7 267 59.9
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 8.7e-90 334.3 267 61.4
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 1.5e-89 333.6 266 63.5
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 1.5e-89 333.6 272 63.2
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 4.3e-89 332.0 266 62.4
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 4.3e-89 332.0 266 61.7
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 5.7e-89 331.6 273 61.5
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 2.1e-88 329.7 266 61.7
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 4.8e-88 328.6 270 61.1
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 6.3e-88 328.2 270 61.5
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 6.3e-88 328.2 265 63.0
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 2.4e-87 326.2 270 61.1
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 2.4e-87 326.2 266 61.7
Lj9C568G3 Lonicera japonica HOM05D004478 ORTHO05D007440 6.9e-87 324.7 266 61.3
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 9.0e-87 324.3 266 61.3
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 1.2e-86 323.9 270 60.4
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 1.2e-86 323.9 271 61.3
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 3.4e-86 322.4 272 62.1
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 5.9e-86 321.6 271 60.1
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 1.3e-85 320.5 270 58.9
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 1.7e-85 320.1 266 62.4
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 2.2e-85 319.7 270 61.5
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 3.8e-85 318.9 270 59.6
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 1.4e-84 317.0 277 60.6
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 1.4e-84 317.0 266 60.9
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 2.5e-84 316.2 266 61.7
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 3.2e-84 315.8 270 58.9
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 5.5e-84 315.1 266 60.9
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 5.5e-84 315.1 267 61.0
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 7.2e-84 314.7 265 60.8
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 9.3e-84 314.3 267 59.9
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 9.3e-84 314.3 270 60.7
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 1.2e-83 313.9 267 60.3
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 2.1e-83 313.2 267 59.2
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 6.1e-83 311.6 267 61.4
PGSC0003DMG400025966 Solanum tuberosum HOM05D004478 ORTHO05D007440 6.1e-83 311.6 267 59.2
Solyc01g091080.3 Solanum lycopersicum HOM05D004478 ORTHO05D007440 1.0e-82 310.8 267 58.8
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 2.3e-82 309.7 268 59.0
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 2.3e-82 309.7 267 58.8
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 2.3e-82 309.7 267 58.8
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 3.0e-82 309.3 267 58.4
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 5.1e-82 308.5 267 60.3
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 6.7e-82 308.1 265 60.0
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 8.7e-82 307.8 267 57.7
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.1e-81 307.4 275 57.1
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 2.5e-81 306.2 266 58.6
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 1.3e-80 303.9 266 58.3
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 3.7e-80 302.4 268 57.5
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 1.4e-79 300.4 266 58.6
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 1.2e-78 297.4 273 56.4
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 2.0e-78 296.6 273 56.8
Peaxi162Scf00013g02923 Petunia axillaris HOM05D004478 ORTHO05D007440 2.0e-78 296.6 294 55.8
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 3.4e-78 295.8 266 57.9
Os10g0508500 Oryza sativa ssp. japonica HOM05D004478 ORTHO05D007440 7.7e-78 294.7 267 55.4
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 1.7e-77 293.5 265 55.8
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 2.2e-77 293.1 266 55.3
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 2.9e-77 292.7 266 57.5
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 5.0e-77 292.0 266 57.5
Carub.0002s1114 Capsella rubella HOM05D004478 ORTHO05D007440 1.4e-76 290.4 267 57.7
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 3.2e-76 289.3 266 57.9
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 5.5e-76 288.5 266 56.8
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 5.5e-76 288.5 266 56.8
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 5.5e-76 288.5 267 57.7
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 4.4e-73 278.9 272 54.4
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 4.4e-73 278.9 266 55.3
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 1.3e-72 277.3 265 55.8
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 5.9e-70 268.5 266 51.9
Zm00001eb220640 Zea mays HOM05D004478 ORTHO05D007440 7.9e-67 258.1 271 50.9
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 5.3e-63 245.4 296 45.9
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 1.8e-50 203.8 264 41.7
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 2.0e-49 200.3 266 42.9
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 9.1e-47 191.4 260 43.8
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 4.5e-46 189.1 258 38.8
SEGI_40120 Sequoiadendron giganteum HOM05D004478 ORTHO05D007440 7.7e-46 188.3 189 48.7
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 1.2e-43 181.0 239 39.7
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 1.7e-32 144.1 290 31.4
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 7.8e-30 135.2 266 33.8
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 4.4e-25 119.4 138 47.8
Actinidia12201 Actinidia chinensis HOM05D004478 ORTHO05D007440 6.4e-24 115.5 81 66.7
CARHR186420 Cardamine hirsuta HOM05D004478 ORTHO05D007440 2.4e-23 113.6 86 66.3
SHI25190 Sapria himalayana HOM05D004478 ORTHO05D037525 7.8e-22 108.6 131 44.3
MCO09G490 Micromonas commoda HOM05D004478 ORTHO05D007440 9.5e-20 101.7 247 32.4
SHI07794 Sapria himalayana HOM05D004478 ORTHO05D037525 8.9e-18 95.1 157 38.2
SHI33403 Sapria himalayana HOM05D004478 ORTHO05D037525 3.7e-16 89.7 122 44.3
AUR62044221 Chenopodium quinoa HOM05D004478 ORTHO05D007440 8.3e-16 88.6 71 60.6
Cre12.g490250 Chlamydomonas reinhardtii HOM05D004478 ORTHO05D007440 2.4e-15 87.0 269 28.3
CAN.G433.9 Capsicum annuum HOM05D004478 ORTHO05D007440 9.2e-15 85.1 107 43.9
SHI43043 Sapria himalayana HOM05D000957 ORTHO05D000754 2.3e-13 80.5 122 39.3
PRCOL_00002890 Prasinoderma coloniale HOM05D004478 ORTHO05D007440 3.3e-12 76.6 202 25.7
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 4.1e-07 59.7 32 75.0


User provided reference genes

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