Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 1.2e-259 899.4 472 100.0
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 1.5e-190 669.8 477 77.1
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 2.7e-59 233.8 496 40.3
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 4.3e-57 226.5 474 40.1
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 2.0e-54 217.6 491 35.6
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 3.4e-54 216.9 492 37.2
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 2.5e-49 200.7 603 31.2
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 2.8e-48 197.2 563 34.5
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 8.2e-48 195.7 654 30.3
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 6.9e-47 192.6 607 33.3
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 9.1e-47 192.2 662 29.6
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 2.9e-45 187.2 484 34.9
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 5.0e-45 186.4 525 34.5
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.4e-44 184.9 663 29.6
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 1.9e-44 184.5 515 34.4
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 3.9e-42 176.8 527 32.4
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 3.3e-41 173.7 554 31.4
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 1.7e-40 171.4 520 33.1
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 4.5e-38 163.3 599 32.4
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.0e-37 162.2 571 31.3
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 3.8e-37 160.2 330 40.3
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.1e-36 158.7 569 29.3
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 1.1e-36 158.7 514 31.3
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.4e-36 158.3 586 30.7
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 3.2e-36 157.1 536 31.3
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 3.6e-35 153.7 479 30.3
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 6.1e-35 152.9 522 32.4
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 2.3e-34 151.0 568 29.4
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 8.8e-34 149.1 810 24.4
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 8.8e-34 149.1 625 27.4
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 1.1e-33 148.7 589 29.5
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 1.5e-33 148.3 515 30.3
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 2.0e-33 147.9 582 28.7
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 2.0e-33 147.9 582 30.2
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 2.6e-33 147.5 625 27.2
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 2.2e-32 144.4 635 29.1
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 6.3e-32 142.9 583 27.6
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 4.1e-31 140.2 473 29.0
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 7.0e-31 139.4 474 28.5
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 9.1e-31 139.0 621 27.7
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 9.1e-31 139.0 566 30.0
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 7.7e-30 136.0 607 28.8
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 2.9e-29 134.0 479 29.6
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 3.8e-29 133.7 534 29.6
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 2.5e-28 131.0 488 27.7
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 5.5e-28 129.8 483 28.4
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 7.2e-28 129.4 410 32.9
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 2.1e-27 127.9 406 29.3
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.8e-26 124.8 601 26.8
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 1.8e-26 124.8 471 29.7
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 7.5e-25 119.4 300 35.7
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 7.5e-25 119.4 146 46.6
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 1.3e-24 118.6 605 26.3
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 1.8e-23 114.8 887 23.7
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 1.6e-22 111.7 607 27.7
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 4.5e-22 110.2 573 26.9
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 5.9e-22 109.8 346 33.5
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 1.3e-21 108.6 679 26.4
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 2.9e-21 107.5 616 24.5
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 1.9e-20 104.8 164 41.5
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.6e-19 101.7 465 24.7
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 4.7e-19 100.1 625 27.4
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 1.0e-18 99.0 480 25.2
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 1.0e-18 99.0 381 30.7
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 1.2e-17 95.5 177 39.0
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 1.2e-17 95.5 69 65.2
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.2e-17 95.5 458 27.3
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.4e-17 94.0 339 33.0
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 4.4e-17 93.6 617 25.9
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 4.4e-17 93.6 478 25.7
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 7.5e-17 92.8 466 27.3
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 2.2e-16 91.3 475 26.5
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 2.2e-16 91.3 470 24.7
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 2.8e-16 90.9 361 30.7
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 3.7e-16 90.5 467 26.3
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.7e-16 90.5 409 29.1
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 8.3e-16 89.4 469 24.7
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 1.1e-15 89.0 475 26.5
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.1e-15 89.0 136 38.2
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 1.4e-15 88.6 171 36.3
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.4e-15 87.8 297 31.3
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 3.1e-15 87.4 70 62.9
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 4.1e-15 87.0 455 25.1
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 4.1e-15 87.0 67 61.2
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 1.6e-14 85.1 472 26.1
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 1.6e-14 85.1 305 29.2
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.6e-14 85.1 502 28.1
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 2.0e-14 84.7 72 62.5
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 2.7e-14 84.3 159 35.8
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 4.5e-14 83.6 453 23.6
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 4.5e-14 83.6 477 26.6
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 7.7e-14 82.8 470 26.4
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.7e-13 81.6 322 32.9
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 3.8e-13 80.5 445 25.2
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 6.6e-13 79.7 598 25.8
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 1.5e-12 78.6 627 24.6
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 1.5e-12 78.6 66 57.6
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 2.1e-11 74.7 447 24.6
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 2.8e-11 74.3 93 48.4
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 3.6e-11 73.9 169 35.5
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 3.6e-11 73.9 453 25.2
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 3.6e-11 73.9 250 31.2
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 4.7e-11 73.6 447 24.6
Haze_03334 Corylus avellana HOM05D007504 ORTHO05D007629 4.7e-11 73.6 91 53.8
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 8.0e-11 72.8 450 24.9
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 1.0e-10 72.4 116 44.8
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.0e-10 72.4 84 45.2
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.8e-10 71.6 212 32.1
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 3.0e-10 70.9 221 27.6
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 3.0e-10 70.9 453 24.1
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 5.2e-10 70.1 119 37.8
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 6.8e-10 69.7 99 40.4
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 6.8e-10 69.7 179 31.3
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 1.2e-09 68.9 448 25.9
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.5e-09 68.6 153 34.0
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 2.0e-09 68.2 410 28.3
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 9.8e-09 65.9 152 38.8
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 1.3e-08 65.5 50 66.0
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.4e-07 61.2 464 23.1


User provided reference genes

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