Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.4e-240 835.9 436 100.0
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 4.8e-204 714.5 437 84.7
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 2.2e-156 556.2 439 66.5
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 1.5e-152 543.5 435 66.7
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 3.1e-150 535.8 435 66.0
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 6.4e-148 528.1 415 66.0
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 7.1e-147 524.6 437 64.8
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 6.0e-146 521.5 439 63.3
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 7.9e-146 521.2 439 65.8
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 2.3e-145 519.6 429 64.1
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 6.7e-145 518.1 439 64.2
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 6.7e-145 518.1 440 64.3
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.3e-143 513.8 442 63.3
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 2.1e-143 513.1 426 63.4
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 4.8e-143 511.9 418 63.6
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 5.3e-142 508.4 403 64.8
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 9.0e-142 507.7 445 62.5
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 9.0e-142 507.7 412 64.8
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 2.0e-141 506.5 432 63.4
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 2.0e-141 506.5 432 63.4
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 7.6e-141 504.6 419 63.2
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 1.0e-140 504.2 426 62.0
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.1e-139 500.7 415 63.9
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 9.3e-139 497.7 424 61.6
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 4.6e-138 495.4 434 62.2
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.5e-136 490.3 410 64.1
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.6e-135 486.9 441 61.5
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 6.2e-135 485.0 441 60.8
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 7.6e-133 478.0 443 60.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 1.9e-131 473.4 430 59.1
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.0e-129 467.6 426 60.1
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 1.3e-129 467.2 433 57.7
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 5.1e-129 465.3 431 58.0
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.5e-128 463.8 443 60.0
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 7.4e-128 461.5 437 57.7
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.1e-126 457.6 443 58.2
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 1.2e-125 454.1 408 59.3
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 2.6e-125 453.0 431 57.3
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.0e-124 451.1 437 56.8
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.3e-124 450.7 437 56.1
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.7e-124 450.3 437 56.1
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 3.8e-124 449.1 437 56.3
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 3.8e-124 449.1 408 58.3
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 3.8e-124 449.1 415 58.1
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 6.5e-124 448.4 437 55.6
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 4.2e-123 445.7 406 57.1
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 7.2e-123 444.9 437 56.1
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 7.2e-123 444.9 437 55.8
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 2.1e-122 443.4 408 57.8
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 3.0e-121 439.5 457 54.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 3.0e-121 439.5 416 55.0
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 8.8e-121 438.0 412 57.8
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 8.8e-121 438.0 406 58.1
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 1.1e-120 437.6 408 57.6
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 6.3e-119 431.8 426 54.7
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 8.2e-119 431.4 437 54.7
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 6.9e-118 428.3 437 54.7
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 2.0e-117 426.8 426 54.2
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 5.5e-115 418.7 408 56.1
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-114 417.2 410 53.9
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 4.4e-112 409.1 432 53.2
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.3e-111 407.5 440 53.2
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 4.8e-111 405.6 440 53.2
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 7.0e-110 401.7 415 52.5
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.2e-109 401.0 387 54.5
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.5e-109 400.6 406 54.4
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.6e-109 399.8 413 52.1
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 2.6e-109 399.8 413 52.5
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 3.5e-109 399.4 353 63.7
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.8e-108 396.0 426 51.9
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 6.5e-108 395.2 411 52.6
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 4.2e-107 392.5 413 51.3
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.5e-107 392.1 439 51.7
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 9.4e-107 391.3 437 51.7
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 8.0e-106 388.3 298 66.4
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.4e-105 387.5 413 51.6
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.3e-105 386.7 426 51.4
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 6.7e-105 385.2 352 57.7
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 7.4e-104 381.7 445 48.1
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.1e-102 377.9 356 61.5
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 5.0e-100 369.0 388 53.4
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 8.5e-100 368.2 422 50.2
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.2e-96 357.8 373 53.1
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 7.5e-96 355.1 429 49.2
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.4e-94 350.9 377 50.9
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 5.4e-94 349.0 344 59.9
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 3.8e-92 342.8 438 45.9
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 7.2e-91 338.6 426 45.8
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 7.5e-88 328.6 292 61.0
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.7e-84 317.4 347 55.0
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 6.8e-81 305.4 434 43.1
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.2e-78 296.6 424 44.1
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 3.4e-72 276.6 381 38.8
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 2.7e-69 266.9 393 39.7
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.5e-64 251.1 393 37.9
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 1.5e-64 251.1 364 41.5
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 4.4e-64 249.6 237 55.3
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.2e-61 241.5 408 34.6
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 4.7e-58 229.6 204 54.4
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 1.8e-49 201.1 202 49.0
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 2.3e-44 184.1 207 51.2
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 2.7e-29 134.0 198 39.9
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.1e-27 128.6 78 75.6
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.6e-21 106.7 119 48.7
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.5e-16 90.1 65 58.5
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.5e-15 86.3 65 60.0
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.9e-14 84.7 57 59.6
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 4.2e-14 83.6 261 27.2
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.0e-12 79.0 116 44.8
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.5e-07 59.3 102 39.2
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.1e-06 58.9 34 73.5
SEGI_05800 Sequoiadendron giganteum HOM05D001726 ORTHO05D001761 1.4e-06 58.5 141 25.5


User provided reference genes

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