Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 7.6e-242 840.1 431 100.0
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.3e-188 663.3 438 77.2
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 6.3e-188 661.0 428 77.1
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 1.5e-186 656.4 439 74.5
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 2.6e-186 655.6 429 76.5
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 2.9e-185 652.1 439 74.5
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 8.5e-185 650.6 433 75.3
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.9e-184 649.4 439 74.7
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.2e-184 647.5 430 75.8
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.1e-183 646.0 430 76.0
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 1.0e-182 643.7 428 75.9
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.4e-182 643.3 430 74.7
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.4e-182 643.3 437 76.0
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.8e-182 642.9 409 78.7
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 5.2e-182 641.3 430 75.3
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 6.7e-182 641.0 425 75.8
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.1e-181 640.2 438 75.8
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.5e-181 639.8 427 75.2
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 4.4e-181 638.3 431 75.9
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.3e-180 636.7 439 74.0
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 3.5e-178 628.6 439 72.2
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 5.9e-178 627.9 444 73.4
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 5.0e-177 624.8 437 72.8
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 6.5e-177 624.4 430 74.7
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.1e-176 623.6 425 73.4
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-176 623.6 437 72.5
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.5e-176 622.5 440 71.8
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 2.5e-176 622.5 437 70.9
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 4.2e-176 621.7 440 72.3
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 4.2e-176 621.7 440 72.3
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 5.5e-176 621.3 428 72.2
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 5.5e-176 621.3 440 72.5
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 1.2e-175 620.2 441 71.9
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.2e-175 620.2 440 73.2
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.1e-175 619.4 437 72.1
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 8.0e-175 617.5 440 71.8
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 5.2e-174 614.8 438 70.5
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 6.7e-174 614.4 440 72.0
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 1.5e-173 613.2 418 72.7
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 9.7e-173 610.5 404 75.5
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 9.7e-173 610.5 440 71.4
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 9.7e-173 610.5 432 70.6
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 6.3e-172 607.8 426 70.7
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 6.3e-172 607.8 441 70.7
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 1.2e-170 603.6 432 69.4
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 3.5e-170 602.1 429 70.6
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 4.5e-170 601.7 427 70.5
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 4.5e-170 601.7 427 70.3
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 1.3e-169 600.1 401 73.6
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.3e-169 600.1 392 76.0
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.3e-169 600.1 433 69.3
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 3.8e-169 598.6 457 67.6
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 5.0e-169 598.2 421 68.9
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 8.5e-169 597.4 432 69.7
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 8.5e-169 597.4 433 69.5
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 1.9e-168 596.3 437 70.7
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 4.2e-168 595.1 419 71.4
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 5.5e-168 594.7 428 71.0
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 5.5e-168 594.7 432 68.8
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.2e-167 593.6 434 68.7
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.2e-167 593.6 427 69.6
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 8.0e-167 590.9 400 73.2
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.5e-165 586.6 418 70.6
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.5e-165 586.6 439 68.1
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 4.4e-165 585.1 430 69.5
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 7.5e-165 584.3 398 73.1
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 7.5e-165 584.3 423 70.0
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.8e-164 582.4 432 69.7
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 4.1e-163 578.6 412 69.4
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.2e-162 577.0 432 69.2
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 2.0e-162 576.2 389 72.8
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 4.5e-162 575.1 439 67.9
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 1.3e-161 573.5 418 70.3
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 8.6e-161 570.9 417 69.3
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 3.3e-160 568.9 483 61.3
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 3.3e-160 568.9 421 67.5
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.6e-159 566.6 534 58.1
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 2.8e-159 565.8 400 71.0
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 3.4e-157 558.9 438 66.4
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 2.2e-156 556.2 403 68.5
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 3.7e-156 555.4 408 69.4
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 3.1e-155 552.4 381 69.3
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 7.0e-155 551.2 429 64.6
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 5.9e-154 548.1 429 66.7
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 5.9e-154 548.1 429 66.7
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.3e-153 547.0 375 74.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 1.3e-153 547.0 397 67.5
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.7e-153 546.6 423 65.2
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 5.6e-152 541.6 363 77.4
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 3.7e-148 528.9 393 69.0
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.6e-144 515.0 369 72.6
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.2e-141 507.3 410 62.2
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 4.1e-139 498.8 397 62.0
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.0e-137 494.2 320 77.2
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 3.4e-133 479.2 395 60.3
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 2.5e-128 463.0 418 58.9
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.1e-127 459.9 392 59.2
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 2.4e-123 446.4 315 69.8
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 1.3e-119 434.1 300 73.7
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 2.7e-114 416.4 418 54.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.1e-110 404.4 397 55.7
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 5.3e-110 402.1 343 64.4
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.2e-109 401.0 292 66.1
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.0e-101 373.6 332 63.6
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.1e-98 363.6 249 74.3
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.0e-92 344.7 227 78.9
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 1.9e-91 340.5 379 48.3
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 2.0e-85 320.5 223 75.3
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 1.3e-79 301.2 219 66.2
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 5.9e-77 292.4 381 45.7
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 4.7e-66 256.1 384 42.2
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 9.8e-56 221.9 154 72.1
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 5.0e-52 209.5 120 82.5
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.7e-48 196.1 138 72.5
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.8e-48 195.3 112 82.1
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.3e-47 192.6 138 71.7
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.8e-46 191.0 138 71.0
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.5e-37 160.2 104 79.8
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 5.2e-33 146.4 113 63.7
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.9e-31 140.6 89 76.4
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 8.3e-31 139.0 89 75.3
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.9e-23 113.2 67 77.6
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.1e-22 112.1 84 65.5
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 9.2e-22 109.0 84 63.1
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.2e-21 108.6 241 41.5
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 2.7e-21 107.5 101 60.4
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 6.6e-20 102.8 75 58.7
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 3.3e-19 100.5 131 46.6
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 2.1e-18 97.8 49 85.7
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.3e-17 94.4 133 45.1
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 4.1e-14 83.6 51 76.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 2.1e-10 71.2 43 72.1
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 1.3e-07 62.0 41 68.3


User provided reference genes

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