Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G1433 Tripterygium wilfordii HOM05D000240 ORTHO05D018195 1.4e-68 262.7 124 100.0
TWI56G0102 Tripterygium wilfordii HOM05D000240 ORTHO05D002608 3.8e-21 105.1 105 56.2
Eucgr.F02228 Eucalyptus grandis HOM05D000240 ORTHO05D002608 8.3e-16 87.4 105 44.8
QL12p038572 Quercus lobata HOM05D000240 ORTHO05D002608 1.1e-15 87.0 105 46.7
CiPaw.07G172400 Carya illinoinensis HOM05D000240 ORTHO05D002608 2.4e-15 85.9 105 45.7
Lalb_Chr14g0368071 Lupinus albus HOM05D000240 ORTHO05D002608 3.1e-15 85.5 105 42.9
Psat6g017440 Pisum sativum HOM05D000240 ORTHO05D002608 3.1e-15 85.5 105 44.8
Migut.C00475 Erythranthe guttata HOM05D000240 ORTHO05D002608 4.1e-15 85.1 105 46.7
Ca_06978_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002608 9.1e-15 84.0 105 42.9
Nn5g30658 Nelumbo nucifera HOM05D000240 ORTHO05D002608 2.7e-14 82.4 105 42.9
Hma1.2p1_1170F.1_g263440 Hydrangea macrophylla HOM05D000240 ORTHO05D002608 3.5e-14 82.0 105 43.8
Atru.chr13.866 Acer truncatum HOM05D000240 ORTHO05D002608 4.5e-14 81.6 105 43.8
MD15G1065700 Malus domestica HOM05D000240 ORTHO05D002608 5.9e-14 81.3 105 42.9
ClCG08G016690 Citrullus lanatus HOM05D000240 ORTHO05D002608 7.7e-14 80.9 105 41.0
CANSAT25G0470 Cannabis sativa HOM05D000240 ORTHO05D002608 1.0e-13 80.5 105 41.0
Sabra02G0091400 Salix brachista HOM05D000240 ORTHO05D002608 1.0e-13 80.5 108 44.4
Gohir.A06G025300 Gossypium hirsutum HOM05D000240 ORTHO05D002608 1.3e-13 80.1 104 42.3
Gohir.D06G022400 Gossypium hirsutum HOM05D000240 ORTHO05D002608 1.3e-13 80.1 104 42.3
Gorai.010G027000 Gossypium raimondii HOM05D000240 ORTHO05D002608 1.3e-13 80.1 104 42.3
Gohir.D06G027000 Gossypium hirsutum HOM05D000240 ORTHO05D002608 1.7e-13 79.7 104 42.3
Cfa013743 Carpinus fangiana HOM05D000240 ORTHO05D002608 2.2e-13 79.3 106 43.4
Haze_22395 Corylus avellana HOM05D000240 ORTHO05D002608 2.2e-13 79.3 106 43.4
Haze_22403 Corylus avellana HOM05D000240 ORTHO05D002608 2.2e-13 79.3 106 43.4
Potri.014G013300 Populus trichocarpa HOM05D000240 ORTHO05D002608 2.2e-13 79.3 113 40.7
MSTRG.1017 Avicennia marina HOM05D000240 ORTHO05D002608 2.9e-13 79.0 103 44.7
COL.COLO4_28466 Corchorus olitorius HOM05D000240 ORTHO05D002608 2.9e-13 79.0 105 41.0
Lalb_Chr22g0355771 Lupinus albus HOM05D000240 ORTHO05D002608 2.9e-13 79.0 105 40.0
Prupe.1G419600 Prunus persica HOM05D000240 ORTHO05D002608 2.9e-13 79.0 106 42.5
TPR.G13004 Trifolium pratense HOM05D000240 ORTHO05D002608 2.9e-13 79.0 105 41.9
Glyma.14G089072 Glycine max HOM05D000240 ORTHO05D002608 3.8e-13 78.6 108 41.7
MELO3C010787.2 Cucumis melo HOM05D000240 ORTHO05D002608 5.0e-13 78.2 105 40.0
MD08G1078700 Malus domestica HOM05D000240 ORTHO05D002608 5.0e-13 78.2 105 41.0
Sabra14G0008100 Salix brachista HOM05D000240 ORTHO05D002608 5.0e-13 78.2 113 42.5
SGA_v2.0_scaffold14G07077 Striga asiatica HOM05D000240 ORTHO05D002608 5.0e-13 78.2 110 40.0
Ciclev10027806m.g Citrus clementina HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 41.0
FvH4_2g32710 Fragaria vesca HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 39.0
FAN15G2617 Fragaria x ananassa HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 39.0
FAN20G2284 Fragaria x ananassa HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 39.0
FAN24G0204 Fragaria x ananassa HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 39.0
Glyma.17G233200 Glycine max HOM05D000240 ORTHO05D002608 6.5e-13 77.8 108 41.7
PGR031G0176 Punica granatum HOM05D000240 ORTHO05D002608 6.5e-13 77.8 105 40.0
AUR62037459 Chenopodium quinoa HOM05D000240 ORTHO05D002608 8.5e-13 77.4 105 40.0
Phvul.001G029600 Phaseolus vulgaris HOM05D000240 ORTHO05D002608 8.5e-13 77.4 107 42.1
CsaV3_2G025940 Cucumis sativus L. HOM05D000240 ORTHO05D002608 1.1e-12 77.0 105 39.0
Duzib093G1309 Durio zibethinus HOM05D000240 ORTHO05D002608 1.1e-12 77.0 104 41.3
RcHm_v2.0_Chr6g0309971 Rosa chinensis HOM05D000240 ORTHO05D002608 1.1e-12 77.0 105 40.0
TAR628G0964 Trochodendron aralioides HOM05D000240 ORTHO05D002608 1.1e-12 77.0 105 42.9
Lj5g0010376 Lotus japonicus HOM05D000240 ORTHO05D002608 1.5e-12 76.6 105 41.9
Cpa.g.sc524.3 Carica papaya HOM05D000240 ORTHO05D002608 1.9e-12 76.3 106 42.5
VMungo0647G2543 Vigna mungo HOM05D000240 ORTHO05D002608 1.9e-12 76.3 107 41.1
AUR62035009 Chenopodium quinoa HOM05D000240 ORTHO05D002608 2.5e-12 75.9 105 40.0
Medtr1g017540 Medicago truncatula HOM05D000240 ORTHO05D002608 2.5e-12 75.9 105 41.0
Thecc.08G085000 Theobroma cacao HOM05D000240 ORTHO05D002608 3.2e-12 75.5 105 41.9
Sc15g0005400 Simmondsia chinensis HOM05D000240 ORTHO05D002608 7.2e-12 74.3 106 42.5
FAN27G1967 Fragaria x ananassa HOM05D000240 ORTHO05D002608 9.4e-12 73.9 105 39.0
Actinidia29631 Actinidia chinensis HOM05D000240 ORTHO05D002608 1.2e-11 73.6 105 41.0
CAN.G1239.11 Capsicum annuum HOM05D000240 ORTHO05D002608 1.2e-11 73.6 106 39.6
Dinv44933 Davidia involucrata HOM05D000240 ORTHO05D002608 1.6e-11 73.2 105 40.0
CiPaw.08G052100 Carya illinoinensis HOM05D000240 ORTHO05D002608 2.1e-11 72.8 103 40.8
Cc10_g07590 Coffea canephora HOM05D000240 ORTHO05D002608 2.1e-11 72.8 107 42.1
Nitab4.5_0001426g0030 Nicotiana tabacum HOM05D000240 ORTHO05D002608 2.7e-11 72.4 106 39.6
Nitab4.5_0002796g0020 Nicotiana tabacum HOM05D000240 ORTHO05D002608 2.7e-11 72.4 106 39.6
PSO541G1283 Papaver somniferum HOM05D000240 ORTHO05D002608 3.6e-11 72.0 109 39.4
Gohir.A02G080300 Gossypium hirsutum HOM05D000240 ORTHO05D002608 6.1e-11 71.2 105 36.2
Sopen04g031170 Solanum pennellii HOM05D000240 ORTHO05D002608 6.1e-11 71.2 106 39.6
GSVIVG01009305001 Vitis vinifera HOM05D000240 ORTHO05D002608 6.1e-11 71.2 105 38.1
Thhalv10023277m.g Eutrema salsugineum HOM05D000240 ORTHO05D002608 8.0e-11 70.9 107 43.9
Sed0004256 Sechium edule HOM05D000240 ORTHO05D002608 8.0e-11 70.9 105 39.0
ATR0739G054 Amborella trichopoda HOM05D000240 ORTHO05D002608 1.8e-10 69.7 105 37.1
Aqoxy6G02483 Aquilegia oxysepala HOM05D000240 ORTHO05D002608 1.8e-10 69.7 111 37.8
Gorai.005G098800 Gossypium raimondii HOM05D000240 ORTHO05D002608 1.8e-10 69.7 105 38.1
PGSC0003DMG400004917 Solanum tuberosum HOM05D000240 ORTHO05D002608 3.0e-10 68.9 106 38.7
arahy.Tifrunner.gnm1.ann1.IRA02K Arachis hypogaea HOM05D000240 ORTHO05D002608 4.0e-10 68.6 45 64.4
BcaC04g22168 Brassica carinata HOM05D000240 ORTHO05D002608 5.2e-10 68.2 108 39.8
A09p18080 Brassica napus HOM05D000240 ORTHO05D002608 5.2e-10 68.2 108 39.8
C09p22550 Brassica napus HOM05D000240 ORTHO05D002608 5.2e-10 68.2 108 39.8
BolC9t55171H Brassica oleracea HOM05D000240 ORTHO05D002608 5.2e-10 68.2 108 39.8
BraA09t37442Z Brassica rapa HOM05D000240 ORTHO05D002608 5.2e-10 68.2 108 39.8
CARHR283830 Cardamine hirsuta HOM05D000240 ORTHO05D002608 5.2e-10 68.2 107 42.1
Oeu048569.1 Olea europaea HOM05D000240 ORTHO05D002608 5.2e-10 68.2 107 41.1
PSO675G0923 Papaver somniferum HOM05D000240 ORTHO05D002608 5.2e-10 68.2 109 37.6
AT1G59540 Arabidopsis thaliana HOM05D000240 ORTHO05D002608 6.8e-10 67.8 105 41.0
AL2G17530 Arabidopsis lyrata HOM05D000240 ORTHO05D002608 8.8e-10 67.4 107 42.1
Gohir.D02G088200 Gossypium hirsutum HOM05D000240 ORTHO05D002608 8.8e-10 67.4 105 36.2
Carub.0002s0589 Capsella rubella HOM05D000240 ORTHO05D002608 1.2e-09 67.0 107 41.1
Peaxi162Scf00340g00071 Petunia axillaris HOM05D000240 ORTHO05D002608 1.2e-09 67.0 46 65.2
Hund05279 Selenicereus undatus HOM05D000240 ORTHO05D002608 1.2e-09 67.0 105 35.2
arahy.Tifrunner.gnm1.ann1.UY9GAA Arachis hypogaea HOM05D000240 ORTHO05D002608 1.5e-09 66.6 45 62.2
Nn6g34521 Nelumbo nucifera HOM05D000240 ORTHO05D002608 2.0e-09 66.2 107 38.3
Lj4A75G32 Lonicera japonica HOM05D000240 ORTHO05D002608 3.4e-09 65.5 112 38.4
Sp2g05010 Schrenkiella parvula HOM05D000240 ORTHO05D002608 3.4e-09 65.5 107 41.1
Manes.05G183300 Manihot esculenta HOM05D000240 ORTHO05D002608 4.4e-09 65.1 107 37.4
Aa31LG2G10580 Aethionema arabicum HOM05D000240 ORTHO05D002608 9.8e-09 63.9 107 41.1
MBI16_g32084_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D002608 1.7e-08 63.2 98 38.8
THA.LOC104816760 Tarenaya hassleriana HOM05D000240 ORTHO05D002608 1.7e-08 63.2 107 39.3
EL10Ac1g02353 Beta vulgaris HOM05D000240 ORTHO05D002608 2.2e-08 62.8 107 38.3
Actinidia19586 Actinidia chinensis HOM05D000240 ORTHO05D018195 2.8e-08 62.4 105 35.2
SEGI_04571 Sequoiadendron giganteum HOM05D000240 ORTHO05D018195 2.8e-08 62.4 105 35.2
BcaC02g10642 Brassica carinata HOM05D000240 ORTHO05D002608 6.3e-08 61.2 105 40.0
C04p26110 Brassica napus HOM05D000240 ORTHO05D002608 6.3e-08 61.2 105 40.0
BolC4t24193H Brassica oleracea HOM05D000240 ORTHO05D002608 6.3e-08 61.2 105 40.0
DCAR_020061 Daucus carota HOM05D000240 ORTHO05D002608 6.3e-08 61.2 105 36.2
Migut.O00025 Erythranthe guttata HOM05D000240 ORTHO05D002608 6.3e-08 61.2 45 60.0
BcaC06g31787 Brassica carinata HOM05D000240 ORTHO05D002608 8.3e-08 60.8 107 40.2
unitig_26.g9868 Utricularia gibba HOM05D000240 ORTHO05D002608 4.1e-07 58.5 46 60.9
Lsat_1_v5_gn_6_108441 Lactuca sativa HOM05D000240 ORTHO05D002608 1.2e-06 57.0 109 36.7
CDE01G0603 Ceratophyllum demersum HOM05D000240 ORTHO05D002608 2.0e-06 56.2 105 32.4
HanXRQChr05g0163591 Helianthus annuus HOM05D000240 ORTHO05D002608 5.9e-06 54.7 109 39.4
Pp3c3_10820 Physcomitrium patens HOM05D000240 ORTHO05D002608 5.9e-06 54.7 41 56.1


User provided reference genes

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