Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-52 209.5 107 100.0
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.1e-47 192.2 107 91.6
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 4.0e-43 177.9 112 79.5
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 1.5e-42 176.0 113 77.9
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 9.9e-42 173.3 112 76.8
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.2e-39 166.4 109 78.0
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.2e-39 166.4 112 74.1
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.2e-39 166.4 112 75.0
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.2e-39 166.4 112 75.0
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 2.1e-39 165.6 108 77.8
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.7e-39 165.2 106 73.6
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 3.5e-39 164.9 107 73.8
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.5e-39 164.9 112 74.1
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 6.0e-39 164.1 107 72.9
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.0e-38 163.3 109 78.0
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.0e-38 161.8 110 74.5
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 3.0e-38 161.8 106 74.5
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 3.0e-38 161.8 106 74.5
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 6.6e-38 160.6 106 76.4
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 6.6e-38 160.6 103 77.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.1e-37 159.8 101 79.2
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.9e-37 159.1 101 77.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.3e-37 158.3 107 72.9
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 3.3e-37 158.3 101 77.2
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.8e-36 155.2 111 72.1
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 8.1e-36 153.7 112 70.5
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-35 152.9 114 67.5
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.4e-35 152.1 114 67.5
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.4e-35 152.1 114 67.5
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 6.9e-35 150.6 97 78.4
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 9.0e-35 150.2 105 67.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.5e-34 149.4 108 73.1
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.5e-34 149.4 114 66.7
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.4e-34 148.3 108 72.2
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 4.4e-34 147.9 116 65.5
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 7.6e-34 147.1 100 68.0
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.2e-33 145.6 108 71.3
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.2e-33 145.6 100 69.0
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.9e-33 144.4 116 63.8
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.9e-33 144.4 100 68.0
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 6.4e-33 144.1 109 67.0
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.1e-32 143.3 109 68.8
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.4e-32 142.9 112 66.1
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-32 142.9 108 66.7
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 2.4e-32 142.1 103 66.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 7.1e-32 140.6 94 74.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.2e-31 139.8 103 68.9
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.6e-31 139.4 101 69.3
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 6.0e-31 137.5 113 61.1
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 7.8e-31 137.1 100 68.0
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.0e-30 136.7 104 64.4
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.7e-30 136.0 102 65.7
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.9e-30 134.8 108 63.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.9e-30 134.8 111 61.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 8.7e-30 133.7 101 64.4
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.5e-29 132.9 109 61.5
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.5e-29 132.9 117 59.0
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.5e-29 132.9 101 67.3
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.9e-29 132.5 102 67.6
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.9e-29 132.5 118 60.2
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 2.5e-29 132.1 97 66.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.3e-29 131.7 104 62.5
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 4.3e-29 131.3 120 58.3
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.6e-29 131.0 120 58.3
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 7.3e-29 130.6 117 59.0
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.6e-28 129.4 107 63.6
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.6e-28 129.4 104 61.5
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.6e-28 129.4 118 59.3
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.1e-28 129.0 113 60.2
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 3.6e-28 128.3 120 57.5
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.6e-28 128.3 106 61.3
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.6e-28 128.3 109 58.7
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.8e-28 127.9 120 56.7
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.8e-28 127.9 120 56.7
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.8e-28 127.9 120 56.7
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 4.8e-28 127.9 101 62.4
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 8.1e-28 127.1 123 56.1
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 8.1e-28 127.1 120 57.5
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 8.1e-28 127.1 101 63.4
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 1.4e-27 126.3 100 61.0
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.1e-27 125.2 100 60.0
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 4.0e-27 124.8 103 59.2
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 4.0e-27 124.8 121 56.2
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 5.3e-27 124.4 104 60.6
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.3e-27 124.4 106 59.4
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 6.9e-27 124.0 94 66.0
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 9.0e-27 123.6 105 59.0
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.5e-26 122.9 115 57.4
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 2.0e-26 122.5 105 59.0
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.6e-26 122.1 112 58.9
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.4e-26 121.7 118 55.1
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.4e-26 121.7 112 58.9
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 4.5e-26 121.3 112 57.1
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 7.6e-26 120.6 105 60.0
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 9.9e-26 120.2 107 57.9
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.3e-25 119.8 108 55.6
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.3e-25 119.8 105 59.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.7e-25 119.4 118 53.4
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 2.9e-25 118.6 102 57.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.9e-25 118.6 110 56.4
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 3.8e-25 118.2 107 60.7
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.9e-24 115.9 118 52.5
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.9e-24 115.9 94 61.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.2e-24 114.8 107 55.1
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 4.2e-24 114.8 106 54.7
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 7.1e-24 114.0 106 52.8
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 2.7e-23 112.1 103 55.3
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 6.0e-23 110.9 120 50.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 6.0e-23 110.9 120 50.8
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.0e-23 110.9 106 54.7
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 7.9e-23 110.5 115 52.2
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.8e-22 109.4 94 57.4
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 5.1e-22 107.8 113 51.3
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 6.7e-22 107.5 107 53.3
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 6.7e-22 107.5 107 52.3
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 5.6e-21 104.4 96 56.2
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 9.6e-21 103.6 111 46.8
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 9.6e-21 103.6 111 49.5
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-20 102.4 117 50.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.8e-20 102.1 108 50.0
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 3.1e-19 98.6 76 63.2
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 3.1e-19 98.6 103 48.5
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 3.1e-19 98.6 110 46.4
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 3.1e-19 98.6 115 45.2
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.1e-16 90.1 108 45.4
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 2.1e-15 85.9 73 68.5
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 1.2e-10 70.1 68 55.9
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.1e-07 59.3 56 53.6
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.9e-06 55.1 55 52.7


User provided reference genes

Program Settings