Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.8e-114 415.2 203 100.0
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.7e-82 309.7 202 79.2
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.5e-78 295.8 202 76.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.8e-44 183.3 205 53.7
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.5e-43 178.7 202 53.0
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 5.8e-43 178.3 205 50.7
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.8e-42 175.6 202 50.5
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 8.4e-42 174.5 198 50.5
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.4e-41 172.9 206 50.5
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.4e-41 172.9 202 49.5
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 7.1e-41 171.4 200 53.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.6e-40 170.2 202 50.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.7e-40 169.5 202 49.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 4.6e-40 168.7 199 54.8
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.3e-39 167.2 204 51.0
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.6e-38 161.0 207 47.3
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 4.5e-35 152.1 207 47.3
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 4.5e-35 152.1 207 47.3
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 2.2e-34 149.8 199 45.7
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.9e-33 146.7 206 46.6
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 7.1e-33 144.8 181 49.7
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.3e-33 144.4 207 43.5
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.6e-32 143.7 215 42.3
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.3e-31 140.6 204 46.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 3.9e-31 139.0 207 43.0
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.9e-31 139.0 203 43.8
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 8.7e-31 137.9 193 44.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 8.7e-31 137.9 204 46.6
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 3.3e-30 136.0 210 43.8
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 4.3e-30 135.6 206 43.7
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 5.7e-30 135.2 208 43.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 7.4e-30 134.8 222 44.6
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 9.6e-30 134.4 192 45.3
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.3e-29 134.0 206 43.7
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 6.3e-29 131.7 215 39.5
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 6.3e-29 131.7 201 43.8
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 6.3e-29 131.7 208 43.3
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 6.3e-29 131.7 225 38.2
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.4e-28 129.8 206 42.7
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 5.3e-28 128.6 194 41.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 4.5e-27 125.6 216 38.9
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 7.6e-27 124.8 181 42.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.3e-26 124.0 207 44.0
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 8.4e-26 121.3 182 41.2
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 3.2e-25 119.4 187 42.8
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 4.2e-25 119.0 204 40.2
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 7.2e-25 118.2 195 40.5
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.6e-24 117.1 202 40.1
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 2.7e-24 116.3 188 39.9
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.8e-23 113.6 194 40.7
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.1e-23 112.1 220 35.9
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 6.7e-23 111.7 179 40.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 8.7e-23 111.3 190 38.4
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 8.7e-23 111.3 190 38.4
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.5e-22 110.5 216 36.6
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 2.5e-22 109.8 183 39.3
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.3e-22 109.0 193 38.3
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 4.3e-22 109.0 222 36.0
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.7e-22 108.6 183 39.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 9.7e-22 107.8 166 41.0
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 9.7e-22 107.8 200 38.0
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.6e-21 107.1 190 38.4
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 3.7e-21 105.9 211 37.9
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 6.3e-21 105.1 219 33.8
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.2e-21 104.8 220 35.0
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.1e-20 104.4 219 33.3
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.1e-20 104.4 206 37.4
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.8e-20 103.6 218 33.5
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.8e-20 103.6 184 38.0
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 3.1e-20 102.8 248 33.5
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 3.1e-20 102.8 198 40.9
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 6.9e-20 101.7 208 37.0
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-19 100.9 205 38.5
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.6e-19 99.8 196 35.7
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 3.4e-19 99.4 104 52.9
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 4.5e-19 99.0 208 36.1
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.5e-19 99.0 198 37.4
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 5.9e-19 98.6 203 34.0
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 7.7e-19 98.2 199 37.2
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 7.7e-19 98.2 200 34.5
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 5.0e-18 95.5 218 34.4
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.9e-17 93.6 188 37.8
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.9e-17 93.6 194 36.6
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 4.2e-17 92.4 206 34.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.6e-16 90.5 176 33.5
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.6e-16 90.5 176 33.5
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.6e-16 90.5 206 34.5
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 4.6e-16 89.0 214 33.2
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.0e-15 87.8 206 32.0
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 8.8e-15 84.7 240 32.5
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 8.8e-15 84.7 186 36.6
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 2.2e-13 80.1 201 29.4
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.8e-13 79.7 149 37.6
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 4.1e-12 75.9 185 35.1
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 5.3e-12 75.5 193 35.2
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 9.1e-12 74.7 226 31.0
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.7e-10 70.5 200 32.5
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.9e-10 69.7 184 33.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 7.2e-09 65.1 163 31.3
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 6.1e-08 62.0 209 27.8
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.3e-07 60.1 134 36.6
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 3.9e-07 59.3 192 30.7
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 5.1e-07 58.9 187 31.6
Cpa.g.sc828.3 Carica papaya HOM05D007182 ORTHO05D008919 2.0e-06 57.0 59 59.3
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 5.7e-06 55.5 183 26.2


User provided reference genes

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