Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.6e-195 685.3 355 100.0
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.9e-169 599.4 349 89.1
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 4.5e-115 418.7 349 64.2
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.4e-113 413.7 355 64.8
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.3e-111 406.4 374 61.0
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.1e-110 404.1 356 64.0
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 5.7e-110 401.7 351 63.0
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 5.7e-110 401.7 269 74.7
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 6.3e-109 398.3 261 75.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 4.5e-107 392.1 354 62.7
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 7.7e-107 391.3 354 61.3
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 2.2e-106 389.8 355 59.2
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.2e-106 389.8 269 72.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.5e-106 387.9 345 61.7
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.1e-105 387.5 355 61.7
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.9e-105 386.7 358 61.5
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.5e-105 386.3 355 60.3
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 2.5e-105 386.3 356 58.4
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 7.2e-105 384.8 358 58.7
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 7.2e-105 384.8 344 61.3
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 2.3e-103 379.8 355 60.0
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 3.0e-103 379.4 399 56.1
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 4.3e-102 375.6 367 58.6
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 4.3e-102 375.6 352 58.8
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 2.0e-99 366.7 363 57.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.7e-98 363.6 339 60.5
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 2.2e-98 363.2 364 57.7
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 3.8e-98 362.5 356 57.6
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.4e-97 360.5 357 56.3
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.5e-97 359.8 292 62.3
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 2.5e-97 359.8 360 56.1
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 4.2e-97 359.0 358 56.1
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.6e-96 357.1 302 60.6
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.0e-95 354.4 355 56.9
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.9e-95 352.4 354 56.2
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 8.8e-95 351.3 351 55.8
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 8.8e-95 351.3 261 67.0
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.1e-94 350.9 354 56.2
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 2.6e-94 349.7 265 66.4
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 3.3e-94 349.4 265 66.0
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 9.7e-94 347.8 350 57.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.3e-93 347.4 302 60.9
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 3.7e-93 345.9 319 58.6
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.2e-93 344.7 329 56.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.1e-92 344.4 349 54.4
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.8e-92 343.6 329 56.8
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 3.1e-92 342.8 349 56.4
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 7.0e-92 341.7 303 60.1
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.2e-91 340.9 374 53.2
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.5e-91 340.5 368 55.2
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 2.0e-91 340.1 299 60.5
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 3.5e-91 339.3 351 54.4
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 5.9e-91 338.6 290 61.0
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.3e-90 337.4 329 55.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 1.7e-90 337.0 295 61.4
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 2.9e-90 336.3 289 60.2
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 5.0e-90 335.5 364 53.3
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 5.0e-90 335.5 328 56.4
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.0e-90 335.5 344 54.7
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 8.5e-90 334.7 299 59.9
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.2e-89 332.8 358 53.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 4.2e-89 332.4 258 65.5
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.2e-88 330.9 347 54.5
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.2e-88 330.9 245 68.6
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.1e-88 330.1 294 59.2
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 2.7e-88 329.7 286 61.2
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 3.6e-88 329.3 344 54.7
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 3.6e-88 329.3 338 55.9
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 4.7e-88 328.9 344 53.2
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 4.7e-88 328.9 289 60.9
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 8.0e-88 328.2 347 55.0
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 8.8e-87 324.7 344 54.9
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.5e-86 323.9 361 51.5
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.5e-86 323.9 361 51.5
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.5e-86 323.9 263 64.3
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.5e-86 323.9 305 57.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 7.4e-86 321.6 355 53.0
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 7.4e-86 321.6 346 52.6
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.3e-85 320.9 270 62.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.7e-85 320.5 241 68.0
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.7e-85 320.5 344 52.0
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.2e-85 320.1 351 53.3
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 2.8e-85 319.7 283 58.7
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 2.8e-85 319.7 388 48.2
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 3.7e-85 319.3 362 51.4
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 3.7e-85 319.3 362 51.9
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 4.8e-85 318.9 346 52.6
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 6.3e-85 318.5 382 49.7
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 4.1e-84 315.8 390 49.7
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.2e-83 314.3 260 61.5
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.2e-83 314.3 256 63.7
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 5.9e-83 312.0 385 49.6
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 7.7e-83 311.6 255 63.5
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.3e-82 310.8 256 61.7
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.2e-82 310.1 277 58.5
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.1e-81 307.8 348 52.9
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.5e-81 307.4 213 70.4
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 7.2e-81 305.1 258 61.6
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.1e-80 303.5 389 47.8
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 4.0e-79 299.3 232 65.9
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.8e-79 298.5 191 74.9
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.7e-77 293.9 287 56.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 6.3e-77 292.0 278 54.3
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.1e-73 281.2 202 70.8
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.1e-72 276.9 187 72.7
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 6.6e-66 255.4 261 54.4
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 8.9e-63 245.0 150 79.3
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.8e-60 237.3 212 54.2
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 5.4e-60 235.7 295 44.1
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 2.7e-59 233.4 272 44.1
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.5e-57 227.6 272 43.8
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.9e-52 210.7 205 53.2
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 7.0e-52 208.8 121 79.3
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.7e-50 204.1 169 56.8
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 8.6e-50 201.8 324 39.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 5.2e-47 192.6 187 52.9
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.4e-46 189.9 205 48.8
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 5.8e-46 189.1 103 84.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.6e-30 137.1 79 77.2
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 8.4e-29 132.1 69 85.5
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.7e-18 97.8 184 38.6
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 4.0e-15 86.7 61 65.6
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 5.6e-09 66.2 138 29.7
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.1e-07 62.0 43 65.1
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 1.0e-05 55.5 148 27.0


User provided reference genes

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