Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 4.9e-42 174.1 90 100.0
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 9.5e-30 133.3 86 79.1
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 1.8e-28 129.0 81 80.2
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 6.8e-28 127.1 81 77.8
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 2.6e-27 125.2 83 73.5
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 2.6e-27 125.2 82 78.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 2.6e-27 125.2 82 78.0
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 4.4e-27 124.4 81 76.5
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 7.5e-27 123.6 84 69.0
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 9.9e-27 123.2 81 75.3
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 1.3e-26 122.9 86 74.4
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 1.3e-26 122.9 88 71.6
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 2.2e-26 122.1 81 74.1
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 4.9e-26 120.9 81 76.5
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 6.4e-26 120.6 81 74.1
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.4e-25 119.4 78 75.6
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 1.9e-25 119.0 81 72.8
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 2.4e-25 118.6 81 72.8
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 2.4e-25 118.6 77 75.3
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 3.2e-25 118.2 81 71.6
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 3.2e-25 118.2 80 73.8
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 4.1e-25 117.9 77 75.3
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 4.1e-25 117.9 88 69.3
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 4.1e-25 117.9 86 70.9
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 5.4e-25 117.5 88 69.3
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 5.4e-25 117.5 81 72.8
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 7.1e-25 117.1 81 74.1
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 7.1e-25 117.1 81 75.3
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 9.2e-25 116.7 77 72.7
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 9.2e-25 116.7 81 69.1
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 1.2e-24 116.3 78 71.8
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.2e-24 116.3 83 71.1
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 1.2e-24 116.3 81 71.6
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 1.6e-24 115.9 77 75.3
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 1.6e-24 115.9 77 75.3
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.6e-24 115.9 88 68.2
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 1.6e-24 115.9 81 74.1
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 1.6e-24 115.9 81 69.1
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 1.6e-24 115.9 81 67.9
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 1.6e-24 115.9 78 71.8
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 2.7e-24 115.2 81 67.9
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 2.7e-24 115.2 81 67.9
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.7e-24 115.2 81 71.6
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 3.5e-24 114.8 83 71.1
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 3.5e-24 114.8 84 67.9
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 3.5e-24 114.8 78 70.5
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 4.6e-24 114.4 81 72.8
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 4.6e-24 114.4 81 67.9
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 7.8e-24 113.6 81 69.1
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.0e-23 113.2 77 71.4
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 1.3e-23 112.8 80 71.2
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 1.3e-23 112.8 80 68.8
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 2.3e-23 112.1 77 70.1
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.3e-23 112.1 81 66.7
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-23 111.3 72 76.4
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 3.9e-23 111.3 77 68.8
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 5.1e-23 110.9 81 67.9
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.1e-22 109.8 78 69.2
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.5e-22 109.4 80 70.0
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 1.9e-22 109.0 81 65.4
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 1.9e-22 109.0 77 67.5
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 1.9e-22 109.0 83 67.5
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.5e-22 108.6 76 72.4
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 4.3e-22 107.8 86 64.0
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 4.3e-22 107.8 75 70.7
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 5.6e-22 107.5 81 65.4
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 7.3e-22 107.1 77 67.5
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 9.5e-22 106.7 83 63.9
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 9.5e-22 106.7 80 66.2
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 1.6e-21 105.9 78 67.9
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.1e-21 105.5 74 73.0
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.1e-21 105.5 81 65.4
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 2.8e-21 105.1 77 66.2
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 2.8e-21 105.1 81 63.0
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 3.6e-21 104.8 81 64.2
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.6e-21 104.8 77 68.8
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 4.7e-21 104.4 76 67.1
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 4.7e-21 104.4 77 68.8
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 8.1e-21 103.6 77 67.5
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 4.0e-20 101.3 77 64.9
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 4.0e-20 101.3 74 67.6
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.5e-19 99.4 66 74.2
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 5.8e-19 97.4 81 65.4
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 7.6e-19 97.1 74 62.2
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 7.1e-17 90.5 72 66.7
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 9.2e-17 90.1 61 72.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 2.7e-16 88.6 138 41.3
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.3e-15 86.3 70 64.3
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 2.3e-15 85.5 59 71.2
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 4.3e-14 81.3 82 48.8
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 5.6e-14 80.9 76 55.3
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 7.3e-14 80.5 77 51.9
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 6.4e-10 67.4 44 68.2
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 4.2e-09 64.7 45 60.0
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 7.1e-09 63.9 44 63.6
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 7.1e-09 63.9 44 63.6
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 9.3e-09 63.5 47 59.6
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 9.6e-06 53.5 38 63.2
C02p55660 Brassica napus HOM05D000430 ORTHO05D021673 9.6e-06 53.5 40 65.0
BolC2t11621H Brassica oleracea HOM05D000874 ORTHO05D021673 9.6e-06 53.5 40 65.0


User provided reference genes

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