Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 6.9e-40 167.2 105 100.0
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.7e-36 154.5 105 85.7
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.8e-35 152.5 106 78.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.3e-35 152.1 105 74.3
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.3e-35 152.1 104 76.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 5.1e-35 151.0 106 87.7
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.1e-35 151.0 106 88.7
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 5.1e-35 151.0 105 74.3
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.1e-35 151.0 106 87.7
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 6.7e-35 150.6 104 71.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.1e-34 149.8 105 71.4
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.1e-34 149.8 105 71.4
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.5e-34 149.4 104 76.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 2.0e-34 149.1 106 74.5
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 2.0e-34 149.1 106 74.5
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.6e-34 148.7 105 73.3
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.3e-34 148.3 104 70.2
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 4.4e-34 147.9 106 74.5
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.4e-34 147.1 104 73.1
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 7.4e-34 147.1 104 69.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.7e-33 146.0 104 73.1
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.7e-33 146.0 106 86.8
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.7e-33 146.0 106 72.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 3.7e-33 144.8 104 73.1
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.7e-33 144.8 104 75.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.2e-33 143.7 106 79.2
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 8.2e-33 143.7 106 72.6
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.1e-32 143.3 106 69.8
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.1e-32 143.3 106 69.8
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.1e-32 143.3 104 67.3
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.8e-32 142.5 106 79.2
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.8e-32 142.5 106 68.9
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 3.1e-32 141.7 106 77.4
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 4.1e-32 141.4 105 76.2
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 4.1e-32 141.4 112 83.9
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.3e-32 141.0 101 87.1
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 7.0e-32 140.6 110 71.8
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 7.0e-32 140.6 104 76.9
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.6e-31 139.4 112 74.1
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.6e-31 139.4 112 74.1
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.6e-31 139.4 104 73.1
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.0e-31 139.0 100 76.0
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.5e-31 137.9 105 80.0
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.9e-31 137.5 104 76.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 7.7e-31 137.1 104 77.9
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.7e-30 136.0 112 70.5
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.7e-30 136.0 105 67.6
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.8e-30 134.8 100 77.0
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.0e-30 134.4 106 68.9
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 5.0e-30 134.4 111 82.9
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 6.5e-30 134.0 111 76.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 6.5e-30 134.0 112 74.1
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 6.5e-30 134.0 104 74.0
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 6.5e-30 134.0 97 80.4
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 6.5e-30 134.0 111 77.5
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.5e-29 132.9 106 66.0
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.5e-29 132.9 111 82.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.5e-29 132.9 99 70.7
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.9e-29 132.5 105 68.6
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.9e-29 132.5 106 70.8
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 2.5e-29 132.1 106 80.2
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 2.5e-29 132.1 106 80.2
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 3.2e-29 131.7 100 69.0
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 7.2e-29 130.6 99 79.8
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 9.4e-29 130.2 114 79.8
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 9.4e-29 130.2 110 70.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 9.4e-29 130.2 114 70.2
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.2e-28 129.8 105 64.8
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.2e-28 129.8 99 67.7
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.2e-28 129.8 99 67.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.6e-28 129.4 113 67.3
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 3.6e-28 128.3 110 72.7
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 6.1e-28 127.5 98 74.5
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 8.0e-28 127.1 99 62.6
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.0e-27 126.7 115 71.3
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.4e-27 126.3 113 71.7
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.4e-27 126.3 113 71.7
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.8e-27 125.9 114 71.1
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.8e-27 125.9 105 67.6
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 6.7e-27 124.0 105 68.6
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 6.7e-27 124.0 104 67.3
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 8.8e-27 123.6 111 78.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.0e-26 122.5 103 68.9
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 3.3e-26 121.7 114 71.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 4.4e-26 121.3 105 71.4
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 5.7e-26 120.9 114 73.7
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 5.7e-26 120.9 105 72.4
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 7.5e-26 120.6 109 63.3
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 9.7e-26 120.2 112 72.3
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.7e-25 119.4 109 68.8
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 2.8e-25 118.6 116 60.3
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.8e-25 118.6 108 69.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 6.3e-25 117.5 106 61.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 8.2e-25 117.1 107 71.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 8.2e-25 117.1 107 71.0
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.1e-24 116.7 112 64.3
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.8e-24 115.9 95 66.3
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.8e-24 115.9 111 66.7
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.4e-24 115.5 104 67.3
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 3.1e-24 115.2 105 54.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 4.1e-24 114.8 93 81.7
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 7.0e-24 114.0 64 85.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.6e-23 112.8 88 65.9
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.6e-23 112.8 107 69.2
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.7e-23 112.1 92 75.0
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.9e-21 105.9 88 67.0
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 9.4e-21 103.6 57 87.7
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.8e-19 97.4 63 76.2
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 2.0e-18 95.9 104 58.7
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 6.3e-17 90.9 58 70.7
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 2.2e-14 82.4 68 72.1
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.6e-12 76.3 97 46.4
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.7e-12 74.7 69 73.9
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 8.0e-12 73.9 82 61.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 5.2e-11 71.2 115 50.4
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.3e-09 66.6 101 47.5
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.7e-09 66.2 35 85.7
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 4.9e-09 64.7 63 46.0
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 2.4e-08 62.4 105 54.3
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 6.6e-06 54.3 57 77.2


User provided reference genes

Program Settings