Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1752.3 866 100.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1306.2 868 73.8
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1297.3 880 74.4
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1283.9 882 72.0
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1266.5 882 71.7
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1263.4 870 72.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1261.1 883 72.1
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1252.7 871 73.5
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1250.3 874 72.4
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1242.3 863 73.7
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1237.2 931 67.0
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1229.9 851 71.6
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1229.2 869 71.5
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1228.0 881 71.9
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1226.8 871 69.9
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1216.4 868 72.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1213.7 844 70.0
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1212.6 849 70.2
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1212.2 818 71.0
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1211.8 864 69.4
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1207.6 818 70.8
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1205.7 870 70.7
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1204.9 867 71.0
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1203.7 873 69.5
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1203.0 868 68.7
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1200.3 856 69.9
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1194.9 867 69.4
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1192.9 825 71.3
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1192.2 815 70.2
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1190.3 866 70.1
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1189.9 842 71.4
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 864 69.8
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 921 65.1
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 859 68.2
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1180.2 820 69.9
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1179.9 869 65.9
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1171.0 830 69.2
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1165.6 860 68.3
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1158.7 852 68.0
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1158.3 962 62.5
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1157.9 849 68.4
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 835 68.0
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1155.2 857 65.5
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1147.5 822 67.0
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1146.3 881 65.4
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1144.8 870 66.2
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1144.8 851 65.5
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1143.3 884 64.5
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1139.8 752 74.2
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1139.8 875 63.9
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1139.0 884 63.9
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1137.5 824 66.7
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1136.7 918 60.8
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1135.6 825 66.9
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1134.4 888 63.4
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1133.2 854 66.5
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1132.9 880 63.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1131.3 890 63.4
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1125.2 889 62.9
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1123.6 878 63.2
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1123.6 878 63.2
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1122.8 860 64.1
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1121.7 890 63.1
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1120.9 825 66.9
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1119.4 879 63.4
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1117.4 819 66.7
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1114.0 894 66.8
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1113.2 834 67.0
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1112.8 825 65.2
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1112.8 881 62.8
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1112.4 825 65.2
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1111.3 817 67.1
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1110.9 841 66.7
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1110.1 900 64.1
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1109.4 808 68.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1105.5 695 78.1
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1096.6 889 63.7
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1092.8 840 65.1
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1087.4 830 65.7
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1077.8 850 64.9
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 0.0e+00 1077.4 842 64.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.4e-311 1072.0 817 62.9
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.4e-311 1072.0 856 62.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 3.8e-309 1064.7 872 64.4
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.1e-303 1046.6 749 69.6
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 6.9e-295 1017.3 641 75.4
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 5.5e-292 1007.7 738 65.0
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.6e-291 1006.1 865 57.6
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 3.3e-289 998.4 864 61.1
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.3e-288 996.5 787 66.2
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 2.4e-287 992.3 716 68.7
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 7.2e-284 980.7 697 68.6
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.7e-280 969.5 802 58.4
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 8.5e-269 930.6 860 54.9
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 3.2e-268 928.7 676 68.3
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 8.9e-258 894.0 716 64.2
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 4.7e-243 845.1 853 48.8
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 3.2e-239 832.4 860 47.7
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 6.6e-237 824.7 838 49.8
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 9.3e-215 751.1 742 50.4
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.4e-202 710.7 804 48.1
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 7.2e-191 671.8 509 66.8
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 5.3e-186 655.6 566 53.0
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.9e-184 649.8 481 68.6
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 4.1e-154 549.7 802 38.4
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 9.1e-154 548.5 551 53.7
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.2e-148 531.6 761 38.8
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 9.9e-124 448.7 299 73.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 9.2e-122 442.2 400 54.0
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.4e-117 428.3 341 64.2
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 3.8e-115 420.2 400 57.8
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.4e-93 347.8 247 67.2
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 5.8e-92 343.2 197 77.7
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.6e-92 342.8 188 81.4
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.8e-91 340.5 186 81.7
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 2.5e-87 327.8 246 62.2
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 4.1e-77 293.9 217 65.0
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.9e-74 285.0 415 36.6
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 2.5e-66 258.1 203 56.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.7e-46 192.2 147 57.1
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 3.7e-38 164.5 144 47.9
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.0e-28 132.1 159 42.1
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 3.9e-27 127.9 175 44.6
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.2e-12 79.7 107 44.9
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.7e-11 75.9 89 50.6
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 8.6e-11 73.6 54 66.7
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 8.1e-09 67.0 197 29.9


User provided reference genes

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