Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 9.9e-59 230.3 156 100.0
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.9e-38 162.9 157 63.7
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 6.3e-37 157.9 159 64.8
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.1e-36 157.1 158 65.8
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 9.0e-36 154.1 164 73.2
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 3.4e-35 152.1 155 68.4
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 3.4e-35 152.1 107 72.9
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 7.7e-35 151.0 155 69.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 1.0e-34 150.6 115 68.7
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.0e-34 148.3 111 71.2
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.0e-34 148.3 111 71.2
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.9e-33 146.4 160 70.0
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 2.5e-33 146.0 103 74.8
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 9.4e-33 144.1 104 75.0
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 1.2e-32 143.7 109 68.8
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 1.2e-32 143.7 160 62.5
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 6.1e-32 141.4 158 65.2
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 7.9e-32 141.0 160 68.8
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 7.9e-32 141.0 110 67.3
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.0e-31 140.6 105 69.5
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.0e-31 140.6 108 66.7
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.4e-31 140.2 114 68.4
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.4e-31 140.2 108 70.4
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 2.3e-31 139.4 104 69.2
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 2.3e-31 139.4 107 67.3
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 3.0e-31 139.0 105 70.5
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 5.1e-31 138.3 109 66.1
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 5.1e-31 138.3 108 64.8
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 8.8e-31 137.5 158 60.8
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.1e-30 137.1 153 65.4
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 1.1e-30 137.1 78 89.7
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.5e-30 136.7 110 64.5
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 2.0e-30 136.3 113 68.1
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 2.0e-30 136.3 159 67.3
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 2.0e-30 136.3 99 70.7
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 3.3e-30 135.6 158 60.8
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 3.3e-30 135.6 109 66.1
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 4.3e-30 135.2 99 71.7
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 5.7e-30 134.8 155 65.8
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 7.4e-30 134.4 110 65.5
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 7.4e-30 134.4 103 66.0
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.3e-29 133.7 99 70.7
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.3e-29 133.7 99 70.7
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.3e-29 133.7 99 70.7
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.2e-29 132.9 107 67.3
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 2.2e-29 132.9 112 67.0
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.8e-29 132.5 157 66.2
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 3.7e-29 132.1 110 66.4
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 3.7e-29 132.1 107 67.3
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 4.8e-29 131.7 104 65.4
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 4.8e-29 131.7 110 64.5
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 4.8e-29 131.7 110 61.8
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.8e-29 131.7 99 69.7
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 4.8e-29 131.7 109 66.1
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 8.2e-29 131.0 106 65.1
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 8.2e-29 131.0 103 66.0
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.1e-28 130.6 158 59.5
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.1e-28 130.6 105 67.6
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.4e-28 130.2 110 64.5
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.4e-28 130.2 102 67.6
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.8e-28 129.8 110 63.6
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.8e-28 129.8 110 63.6
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.8e-28 129.8 107 64.5
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 2.4e-28 129.4 109 64.2
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.4e-28 129.4 101 68.3
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 4.1e-28 128.6 109 63.3
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.1e-28 128.6 109 61.5
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.1e-28 128.6 109 61.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 6.9e-28 127.9 123 56.9
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 6.9e-28 127.9 109 63.3
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 6.9e-28 127.9 110 63.6
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 9.1e-28 127.5 106 65.1
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 9.1e-28 127.5 107 64.5
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 9.1e-28 127.5 110 62.7
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.2e-27 127.1 109 66.1
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 1.2e-27 127.1 109 61.5
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.2e-27 127.1 113 64.6
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.5e-27 126.7 109 60.6
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 2.0e-27 126.3 115 64.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 2.6e-27 125.9 113 61.1
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 4.5e-27 125.2 109 62.4
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 4.5e-27 125.2 99 65.7
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 7.7e-27 124.4 158 58.9
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 7.7e-27 124.4 108 59.3
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 7.7e-27 124.4 106 63.2
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 7.7e-27 124.4 106 63.2
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 1.3e-26 123.6 107 62.6
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.7e-26 123.2 111 64.0
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.9e-26 122.5 105 64.8
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.5e-26 120.9 87 72.4
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 1.9e-25 119.8 104 61.5
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 3.2e-25 119.0 108 63.0
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.2e-24 117.1 81 70.4
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 1.6e-24 116.7 112 58.9
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.6e-24 115.5 115 58.3
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.7e-24 115.2 104 61.5
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 4.7e-24 115.2 84 70.2
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 6.1e-24 114.8 133 54.1
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.8e-23 113.2 82 72.0
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 2.3e-23 112.8 86 66.3
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 1.1e-22 110.5 109 52.3
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 1.1e-22 110.5 122 51.6
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 3.3e-22 109.0 105 57.1
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 1.1e-20 104.0 110 52.7
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.8e-20 103.2 85 60.0
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 2.0e-19 99.8 110 50.0
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.9e-19 98.2 171 50.9
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 4.2e-17 92.0 82 59.8
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 5.5e-17 91.7 76 60.5
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.4e-15 87.0 71 60.6
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.5e-14 83.6 59 74.6
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.4e-14 82.0 103 50.5
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 3.7e-13 79.0 51 70.6
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 4.1e-12 75.5 54 66.7
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 5.3e-12 75.1 50 72.0
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.2e-11 73.9 83 49.4
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.0e-10 70.9 108 40.7


User provided reference genes

Program Settings