Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.1e-79 300.1 162 100.0
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 5.7e-17 91.7 131 50.4
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.7e-16 90.1 167 46.1
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 5.4e-15 85.1 148 48.6
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 5.4e-15 85.1 41 85.4
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 5.4e-15 85.1 122 52.5
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 9.1e-15 84.3 45 82.2
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 9.1e-15 84.3 36 91.7
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 9.1e-15 84.3 156 41.0
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.0e-14 83.2 112 43.8
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 2.0e-14 83.2 36 91.7
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 2.7e-14 82.8 140 47.9
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 4.5e-14 82.0 124 41.9
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 4.5e-14 82.0 37 89.2
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.5e-14 82.0 37 86.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 5.9e-14 81.6 36 91.7
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 5.9e-14 81.6 36 88.9
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 5.9e-14 81.6 36 88.9
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 7.7e-14 81.3 41 80.5
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.0e-13 80.9 33 97.0
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.3e-13 80.5 109 48.6
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.3e-13 80.5 109 48.6
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.3e-13 80.5 109 48.6
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.3e-13 80.5 45 77.8
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.3e-13 80.5 43 79.1
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.7e-13 80.1 39 82.1
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.7e-13 80.1 34 91.2
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 1.7e-13 80.1 121 42.1
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.2e-13 79.7 37 86.5
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.2e-13 79.7 131 38.2
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.2e-13 79.7 37 86.5
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.9e-13 79.3 34 88.2
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 2.9e-13 79.3 41 78.0
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 3.8e-13 79.0 37 86.5
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 6.5e-13 78.2 40 80.0
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 6.5e-13 78.2 45 75.6
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 6.5e-13 78.2 45 75.6
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 6.5e-13 78.2 45 75.6
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 8.5e-13 77.8 41 75.6
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 8.5e-13 77.8 40 77.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 8.5e-13 77.8 102 44.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.5e-12 77.0 35 85.7
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.5e-12 77.0 44 72.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.9e-12 76.6 148 35.8
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 1.9e-12 76.6 124 46.0
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.9e-12 76.6 41 73.2
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.9e-12 76.6 124 42.7
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.9e-12 76.6 41 75.6
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.5e-12 76.3 44 68.2
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.2e-12 75.9 144 35.4
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 3.2e-12 75.9 44 72.7
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 3.2e-12 75.9 32 93.8
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 3.2e-12 75.9 92 58.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.2e-12 75.9 34 85.3
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 4.2e-12 75.5 64 56.2
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 4.2e-12 75.5 43 72.1
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 5.5e-12 75.1 44 70.5
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.2e-11 73.9 150 40.0
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.2e-11 73.9 121 40.5
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.2e-11 73.9 36 80.6
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.2e-11 73.9 41 73.2
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.6e-11 73.6 38 76.3
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.6e-11 73.6 117 41.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.6e-11 73.6 118 45.8
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 2.1e-11 73.2 65 52.3
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 2.1e-11 73.2 104 38.5
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 2.1e-11 73.2 104 38.5
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.1e-11 73.2 100 45.0
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 3.6e-11 72.4 122 37.7
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 3.6e-11 72.4 122 37.7
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 4.7e-11 72.0 30 93.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 4.7e-11 72.0 31 93.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 4.7e-11 72.0 31 93.5
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 4.7e-11 72.0 31 93.5
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 8.0e-11 71.2 29 96.6
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 8.0e-11 71.2 36 77.8
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.0e-10 70.9 104 38.5
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.0e-10 70.9 104 42.3
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.4e-10 70.5 30 90.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.8e-10 70.1 29 89.7
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.8e-10 70.1 41 65.9
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.8e-10 70.1 71 45.1
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 2.3e-10 69.7 33 84.8
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 4.0e-10 68.9 98 37.8
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 4.0e-10 68.9 30 86.7
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 5.2e-10 68.6 32 75.0
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 5.2e-10 68.6 29 89.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 5.2e-10 68.6 135 41.5
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 6.8e-10 68.2 33 75.8
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.8e-10 68.2 93 39.8
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 8.8e-10 67.8 30 86.7
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 8.8e-10 67.8 30 86.7
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.0e-09 66.6 29 82.8
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 5.7e-09 65.1 31 77.4
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 7.5e-09 64.7 36 69.4
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 7.5e-09 64.7 113 36.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.7e-08 62.4 30 76.7
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.7e-08 62.4 30 76.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.7e-08 62.4 30 76.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 4.9e-08 62.0 31 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 6.3e-08 61.6 58 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.3e-08 61.2 97 34.0
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.6e-06 57.0 28 75.0


User provided reference genes

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