Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G1125 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 1.4e-77 293.1 172 100.0
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 4.3e-23 112.1 63 84.1
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.5e-12 77.0 63 55.6
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 7.7e-12 74.7 67 53.7
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 9.4e-10 67.8 63 46.0
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.6e-09 67.0 62 50.0
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 3.6e-09 65.9 63 42.9
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 3.6e-09 65.9 63 46.0
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 6.1e-09 65.1 63 42.9
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 6.1e-09 65.1 63 47.6
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.0e-08 64.3 63 42.9
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 1.4e-08 63.9 65 46.2
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 2.3e-08 63.2 63 46.0
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 5.2e-08 62.0 63 42.9
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 6.7e-08 61.6 63 39.7
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-07 60.8 65 44.6
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.1e-07 60.8 63 39.7
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.1e-07 60.8 63 39.7
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 1.5e-07 60.5 62 37.1
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 2.6e-07 59.7 63 39.7
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 2.6e-07 59.7 63 41.3
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 2.6e-07 59.7 65 41.5
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 3.3e-07 59.3 65 43.1
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 4.4e-07 58.9 63 42.9
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 7.4e-07 58.2 63 42.9
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 7.4e-07 58.2 65 41.5
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 7.4e-07 58.2 63 38.1
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 7.4e-07 58.2 63 36.5
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 9.7e-07 57.8 65 40.0
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.3e-06 57.4 63 36.5
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 1.3e-06 57.4 63 39.7
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.7e-06 57.0 63 42.9
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.7e-06 57.0 63 42.9
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-06 57.0 63 36.5
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 2.2e-06 56.6 64 39.1
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 2.2e-06 56.6 64 42.2
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 2.2e-06 56.6 63 36.5
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 2.8e-06 56.2 62 46.8
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.8e-06 56.2 63 42.9
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.8e-06 56.2 48 50.0
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 2.8e-06 56.2 63 36.5
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 3.7e-06 55.8 63 38.1
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 4.8e-06 55.5 65 40.0
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 6.3e-06 55.1 63 38.1
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.3e-06 55.1 54 40.7
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.3e-06 55.1 67 35.8
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 6.3e-06 55.1 63 34.9
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 6.3e-06 55.1 66 37.9
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 8.2e-06 54.7 63 41.3
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 8.2e-06 54.7 63 38.1
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 8.2e-06 54.7 65 40.0


User provided reference genes

Program Settings