Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 8.8e-137 490.3 257 100.0
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 5.2e-97 358.2 257 76.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.3e-76 290.4 257 62.6
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.4e-73 280.4 257 63.8
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.2e-72 277.3 256 60.9
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 1.4e-70 270.4 257 62.3
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.6e-69 266.9 257 59.9
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 2.7e-69 266.2 258 61.6
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 4.6e-69 265.4 257 59.1
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 5.1e-68 261.9 257 58.4
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 5.1e-68 261.9 257 59.9
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 5.2e-65 251.9 257 55.6
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 8.9e-65 251.1 244 58.6
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.5e-64 250.4 257 57.2
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 2.9e-63 246.1 241 58.5
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.1e-62 244.2 258 57.8
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.1e-62 244.2 257 57.2
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 5.4e-62 241.9 258 57.8
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.1e-62 241.5 258 57.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 7.1e-62 241.5 259 57.1
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.0e-60 237.7 257 56.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.5e-59 233.8 260 56.5
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 7.3e-59 231.5 257 55.3
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.8e-58 229.6 258 53.1
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 5.3e-57 225.3 258 57.0
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 6.9e-57 224.9 259 53.3
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 9.0e-57 224.6 263 54.4
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.2e-56 224.2 259 53.3
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.2e-56 224.2 259 53.3
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 5.8e-56 221.9 261 54.0
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 5.8e-56 221.9 260 53.1
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 9.9e-56 221.1 256 54.3
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.7e-55 220.3 263 56.3
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.8e-55 219.2 258 52.3
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 3.8e-55 219.2 259 53.3
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 8.4e-55 218.0 258 53.5
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 7.1e-54 214.9 262 51.9
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.6e-53 213.8 262 51.9
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 3.5e-53 212.6 258 52.3
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 3.5e-53 212.6 257 52.5
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 6.0e-53 211.8 265 51.3
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 3.0e-52 209.5 255 52.5
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 5.1e-52 208.8 257 52.5
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 5.1e-52 208.8 260 53.1
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 5.1e-52 208.8 259 51.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.9e-51 206.8 251 54.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.9e-51 206.8 258 50.8
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.3e-51 205.7 246 52.4
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 5.6e-51 205.3 259 49.4
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 3.7e-50 202.6 217 56.2
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 8.1e-50 201.4 264 50.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 1.1e-49 201.1 243 53.9
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.8e-49 200.3 275 50.5
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 2.4e-49 199.9 258 46.9
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.1e-49 199.5 258 49.6
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 5.3e-49 198.7 227 53.7
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.0e-48 196.8 264 50.8
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.8e-47 192.6 213 54.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 4.9e-47 192.2 244 50.4
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 4.9e-47 192.2 209 56.0
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 3.2e-46 189.5 264 48.5
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 5.5e-46 188.7 264 48.9
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.3e-44 183.3 259 48.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 2.3e-44 183.3 257 45.9
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 3.9e-44 182.6 248 45.6
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.5e-43 179.9 257 48.2
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.3e-42 177.6 260 47.7
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 2.1e-42 176.8 256 47.7
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 2.1e-42 176.8 210 52.4
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.4e-41 174.1 225 51.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.4e-41 174.1 146 66.4
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 5.8e-40 168.7 257 45.9
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 3.8e-39 166.0 226 47.8
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 8.4e-39 164.9 260 47.3
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 1.4e-38 164.1 243 46.9
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.9e-38 163.7 261 46.7
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.7e-37 159.8 105 74.3
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.7e-37 159.8 105 74.3
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 4.6e-37 159.1 128 68.0
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 6.7e-36 155.2 152 58.6
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 1.9e-35 153.7 124 66.1
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.5e-35 153.3 149 60.4
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 3.3e-35 152.9 135 63.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 5.7e-35 152.1 178 53.9
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 7.4e-35 151.8 146 59.6
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.3e-34 151.0 134 64.2
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.6e-34 150.6 256 40.6
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.6e-34 150.6 240 44.6
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.1e-34 150.2 148 60.1
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 2.1e-34 150.2 114 69.3
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 2.1e-34 150.2 125 66.4
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 2.1e-34 150.2 114 69.3
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 2.1e-34 150.2 125 66.4
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 2.1e-34 150.2 114 69.3
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 2.1e-34 150.2 114 69.3
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.8e-34 149.8 260 43.8
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 6.3e-34 148.7 125 65.6
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.4e-33 147.5 152 57.9
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 1.8e-33 147.1 229 46.3
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 9.0e-33 144.8 146 56.8
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 2.6e-32 143.3 184 47.8
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.2e-29 134.4 160 53.1
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.3e-27 125.9 136 55.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.1e-25 121.3 208 42.8
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 5.9e-24 115.5 83 69.9
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 2.5e-22 110.2 142 50.7
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 6.9e-17 92.0 204 37.7
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 3.8e-15 86.3 223 34.5
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 8.2e-10 68.6 177 35.0
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 3.8e-07 59.7 118 35.6
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 9.4e-06 55.1 86 37.2


User provided reference genes

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