Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 3.3e-162 575.1 284 100.0
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.4e-77 293.9 218 73.9
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.4e-75 287.3 218 72.0
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 2.6e-74 283.1 223 70.9
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 4.8e-73 278.9 218 72.0
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 1.2e-68 264.2 228 66.2
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 8.0e-68 261.5 222 66.7
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 1.8e-67 260.4 165 83.0
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 5.2e-67 258.8 218 67.0
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 2.0e-66 256.9 217 66.8
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 5.7e-66 255.4 218 66.1
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 7.7e-63 245.0 217 63.1
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 7.7e-63 245.0 217 63.1
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 1.5e-61 240.7 218 62.8
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.5e-61 240.0 215 62.8
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.5e-61 240.0 217 62.2
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 2.5e-61 240.0 218 62.8
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 5.5e-61 238.8 218 62.4
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 7.2e-61 238.4 218 62.4
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 9.4e-61 238.0 217 62.2
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 1.0e-59 234.6 218 61.9
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 4.0e-59 232.6 218 61.0
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 8.8e-59 231.5 228 58.8
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 1.5e-58 230.7 217 59.4
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 2.0e-58 230.3 222 57.7
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 3.4e-58 229.6 218 58.7
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 5.7e-58 228.8 230 57.4
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 5.7e-58 228.8 230 57.4
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 9.8e-58 228.0 226 58.0
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 1.3e-57 227.6 222 58.6
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 3.7e-57 226.1 215 59.5
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 4.8e-57 225.7 222 56.3
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 1.1e-56 224.6 222 55.9
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 1.4e-56 224.2 221 57.5
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 1.8e-56 223.8 217 57.6
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 2.4e-56 223.4 218 58.3
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 2.4e-56 223.4 218 58.7
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 3.1e-56 223.0 221 57.0
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 4.1e-56 222.6 230 56.1
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 5.4e-56 222.2 228 56.6
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 5.4e-56 222.2 216 57.9
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 9.1e-56 221.5 224 56.2
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 9.1e-56 221.5 221 57.5
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 9.1e-56 221.5 221 56.6
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 1.2e-55 221.1 217 55.3
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 1.2e-55 221.1 218 57.8
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 1.6e-55 220.7 223 57.4
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 3.5e-55 219.5 218 56.0
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 4.5e-55 219.2 215 57.2
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 4.5e-55 219.2 218 55.5
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 5.9e-55 218.8 218 59.2
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 7.7e-55 218.4 224 55.4
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 7.7e-55 218.4 230 57.0
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 1.3e-54 217.6 217 55.3
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 2.2e-54 216.9 221 56.1
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 2.9e-54 216.5 225 54.7
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 3.8e-54 216.1 225 54.7
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 6.5e-54 215.3 228 55.7
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 8.5e-54 214.9 217 56.2
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 8.5e-54 214.9 218 54.6
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 1.5e-53 214.2 224 54.9
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 1.9e-53 213.8 223 55.2
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 1.2e-52 211.1 221 54.3
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 1.2e-52 211.1 216 54.2
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 2.7e-52 209.9 245 51.4
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 8.0e-52 208.4 245 51.0
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 1.0e-51 208.0 218 56.4
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 1.4e-51 207.6 220 54.1
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 4.0e-51 206.1 245 50.6
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 4.0e-51 206.1 232 51.3
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 8.8e-51 204.9 213 51.6
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 1.5e-50 204.1 198 59.1
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 1.5e-50 204.1 245 50.2
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 2.6e-50 203.4 213 51.6
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 1.3e-49 201.1 231 51.5
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 3.7e-49 199.5 215 53.0
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 4.9e-49 199.1 215 53.0
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 4.9e-49 199.1 215 53.0
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 6.3e-49 198.7 230 53.0
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 8.3e-49 198.4 213 50.7
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 1.1e-48 198.0 214 53.7
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 1.1e-48 198.0 214 53.7
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 1.1e-48 198.0 214 53.7
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.4e-48 196.8 213 53.1
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 2.4e-48 196.8 213 50.2
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 2.4e-48 196.8 216 50.9
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 2.4e-48 196.8 214 52.8
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 3.1e-48 196.4 214 49.5
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 5.4e-48 195.7 263 46.4
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 9.2e-48 194.9 236 53.0
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 1.6e-47 194.1 217 51.6
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 2.0e-47 193.7 213 52.1
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 2.7e-47 193.4 220 47.3
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 4.5e-47 192.6 214 50.0
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 5.9e-47 192.2 226 49.6
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 7.7e-47 191.8 239 49.0
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 1.3e-46 191.0 220 48.6
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 2.5e-45 186.8 221 47.1
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 3.3e-45 186.4 206 53.4
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 4.3e-45 186.0 217 49.3
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 2.1e-44 183.7 198 51.0
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 3.6e-44 183.0 225 52.0
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 1.0e-43 181.4 200 52.5
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.0e-43 181.4 214 50.0
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 1.4e-43 181.0 201 51.7
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.3e-43 180.3 215 52.6
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 4.4e-42 176.0 218 47.2
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 9.8e-42 174.9 217 49.8
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 1.3e-41 174.5 222 47.3
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 2.2e-41 173.7 221 48.4
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 1.1e-40 171.4 211 47.9
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 3.0e-38 163.3 217 44.2
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 9.5e-37 158.3 242 40.9
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 2.1e-36 157.1 108 70.4
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 2.1e-36 157.1 160 55.0
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 2.8e-36 156.8 223 41.7
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 3.6e-36 156.4 174 51.7
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 6.2e-36 155.6 215 43.3
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 4.0e-35 152.9 168 53.0
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 4.4e-34 149.4 150 56.7
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 5.0e-30 136.0 115 63.5
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 6.8e-27 125.6 142 54.2
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.0e-26 124.0 199 39.2
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 7.5e-26 122.1 218 37.6
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 9.8e-26 121.7 197 38.6
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 4.9e-25 119.4 135 51.9
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 4.6e-23 112.8 67 76.1
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.3e-22 111.3 153 41.2
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 2.3e-22 110.5 151 40.4
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 5.6e-21 105.9 121 57.9
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.1e-20 104.0 88 61.4
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 4.7e-20 102.8 158 35.4
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 2.3e-19 100.5 68 69.1
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 5.8e-18 95.9 101 47.5
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 8.4e-17 92.0 48 85.4
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 4.6e-15 86.3 111 50.5
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 1.5e-13 81.3 75 56.0
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 9.6e-13 78.6 197 33.0
TPR.G35514 Trifolium pratense HOM05D015550 ORTHO05D014649 4.0e-11 73.2 65 58.5
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 3.9e-06 56.6 98 42.9


User provided reference genes

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