Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 2.2e-112 409.1 223 100.0
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.2e-94 350.1 187 92.0
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 2.4e-90 335.9 190 87.4
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 5.0e-88 328.2 190 86.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 8.0e-86 320.9 170 90.0
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.4e-82 310.1 189 81.5
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.8e-82 309.7 169 87.6
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.6e-81 306.6 169 86.4
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 3.5e-81 305.4 190 77.9
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 3.8e-80 302.0 175 82.3
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 3.8e-80 302.0 175 82.3
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.2e-79 298.9 171 81.3
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.6e-78 296.6 170 81.2
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 4.7e-78 295.0 171 80.1
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.0e-77 292.0 191 74.9
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 5.2e-77 291.6 189 74.1
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 3.4e-76 288.9 169 81.1
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 5.7e-76 288.1 187 74.3
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 9.8e-76 287.3 189 73.5
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.3e-75 287.0 176 79.0
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.7e-75 286.6 183 74.9
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 2.2e-75 286.2 186 74.2
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 2.8e-75 285.8 190 76.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 3.7e-75 285.4 189 73.5
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 3.7e-75 285.4 190 73.2
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 3.7e-75 285.4 186 73.7
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 4.9e-75 285.0 188 75.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 6.3e-75 284.6 170 77.6
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 8.3e-75 284.3 189 72.5
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 8.3e-75 284.3 186 73.7
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 2.4e-74 282.7 190 73.2
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 3.1e-74 282.3 176 76.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.1e-74 282.3 172 77.3
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 3.1e-74 282.3 172 76.7
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 3.1e-74 282.3 179 73.7
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 4.1e-74 282.0 165 78.2
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 2.0e-73 279.6 181 74.6
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 2.7e-73 279.3 194 70.1
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.5e-73 278.9 194 70.1
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 5.9e-73 278.1 176 73.9
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 7.7e-73 277.7 172 76.2
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.0e-72 277.3 175 75.4
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.7e-72 276.6 187 73.3
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.3e-72 276.2 186 71.5
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 2.3e-72 276.2 184 72.8
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 2.9e-72 275.8 190 69.5
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 2.9e-72 275.8 190 73.7
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 6.6e-72 274.6 166 80.7
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.9e-71 273.1 174 73.6
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 2.5e-71 272.7 167 75.4
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 3.3e-71 272.3 192 68.8
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 1.6e-70 270.0 178 70.2
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.6e-70 270.0 175 72.6
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.6e-70 268.9 194 67.5
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.7e-70 268.5 183 71.0
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 6.1e-70 268.1 147 85.0
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 8.0e-70 267.7 187 68.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 1.0e-69 267.3 182 70.3
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.0e-69 267.3 183 70.5
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 2.3e-69 266.2 181 74.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 3.0e-69 265.8 142 89.4
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 5.2e-69 265.0 190 67.4
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.2e-68 263.8 165 75.2
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.5e-68 263.5 185 69.7
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.6e-68 262.7 190 66.8
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 3.4e-68 262.3 185 69.2
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.4e-68 262.3 189 69.3
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 9.8e-68 260.8 184 69.0
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 9.8e-68 260.8 190 65.3
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 9.8e-68 260.8 227 59.9
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.3e-67 260.4 190 70.0
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 8.3e-67 257.7 170 75.3
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.4e-66 256.9 183 69.4
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.8e-66 256.5 164 70.7
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 2.4e-66 256.1 168 69.6
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.4e-66 255.0 167 71.9
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 4.6e-65 251.9 176 70.5
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 5.9e-65 251.5 187 65.8
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.0e-64 250.8 244 57.0
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.3e-63 245.7 191 64.9
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.6e-62 243.4 161 73.9
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.3e-61 239.6 151 76.2
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 5.8e-60 235.0 265 50.6
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.1e-58 230.7 222 56.8
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 3.2e-58 229.2 154 72.1
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 5.4e-58 228.4 139 73.4
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 2.7e-57 226.1 162 71.0
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.3e-56 223.0 139 73.4
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.5e-55 219.5 148 68.9
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.0e-48 197.6 122 73.0
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 6.6e-48 194.9 123 72.4
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 8.6e-48 194.5 123 72.4
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 6.2e-46 188.3 218 47.7
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.4e-45 187.2 122 69.7
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 3.5e-41 172.6 198 46.5
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.1e-38 163.3 179 44.1
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.3e-30 137.5 77 80.5
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 8.1e-30 134.8 74 79.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 3.2e-18 96.3 244 27.0
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 6.5e-11 72.0 119 44.5
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 5.7e-07 58.9 71 52.1
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 7.4e-07 58.5 104 47.1
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 9.6e-07 58.2 53 66.0


User provided reference genes

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