Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9755 Trifolium pratense HOM05D002385 ORTHO05D002245 1.7e-35 152.1 79 100.0
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 4.1e-29 131.0 79 84.8
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 2.7e-28 128.3 79 84.8
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 1.9e-26 122.1 78 83.3
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 7.3e-26 120.2 76 82.9
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 9.6e-26 119.8 80 78.8
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 2.8e-25 118.2 80 76.2
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 2.8e-25 118.2 80 76.2
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 1.1e-24 116.3 79 78.5
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 1.4e-24 115.9 79 78.5
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 3.1e-24 114.8 80 76.2
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 2.0e-23 112.1 68 83.8
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 3.5e-20 101.3 81 63.0
Phvul.005G057400 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 1.7e-19 99.0 63 69.8
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 8.7e-19 96.7 82 67.1
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 1.9e-18 95.5 65 70.8
Glyma.08G172300 Glycine max HOM05D002385 ORTHO05D002245 9.6e-18 93.2 80 67.5
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 1.6e-17 92.4 82 59.8
arahy.Tifrunner.gnm1.ann1.7QB2HQ Arachis hypogaea HOM05D002385 ORTHO05D002245 2.9e-14 81.6 85 60.0
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 1.4e-13 79.3 80 55.0
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 5.4e-13 77.4 79 60.8
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 1.2e-12 76.3 80 62.5
Lalb_Chr20g0108741 Lupinus albus HOM05D002385 ORTHO05D002245 1.6e-12 75.9 81 50.6
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.1e-12 75.5 83 59.0
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 3.5e-12 74.7 79 50.6
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 4.6e-12 74.3 74 59.5
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 4.6e-12 74.3 74 59.5
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 6.0e-12 73.9 79 60.8
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 2.3e-11 72.0 74 58.1
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 3.0e-11 71.6 79 57.0
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 3.9e-11 71.2 80 58.8
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 3.9e-11 71.2 80 55.0
Lalb_Chr25g0284961 Lupinus albus HOM05D002385 ORTHO05D002245 5.1e-11 70.9 79 48.1
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 5.1e-11 70.9 74 55.4
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 5.1e-11 70.9 78 59.0
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 6.7e-11 70.5 69 58.0
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 6.7e-11 70.5 79 55.7
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 8.7e-11 70.1 79 55.7
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 8.7e-11 70.1 80 55.0
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 8.7e-11 70.1 85 51.8
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 8.7e-11 70.1 80 53.8
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 8.7e-11 70.1 80 53.8
arahy.Tifrunner.gnm1.ann1.3UW96L Arachis hypogaea HOM05D002385 ORTHO05D002245 1.5e-10 69.3 80 53.8
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.5e-10 69.3 79 51.9
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 1.5e-10 69.3 76 52.6
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.5e-10 69.3 74 56.8
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.9e-10 68.9 79 55.7
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.9e-10 68.9 77 50.6
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 2.5e-10 68.6 66 62.1
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 2.5e-10 68.6 76 51.3
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 3.3e-10 68.2 71 49.3
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 3.3e-10 68.2 75 53.3
Actinidia11007 Actinidia chinensis HOM05D002385 ORTHO05D002245 4.3e-10 67.8 79 54.4
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 4.3e-10 67.8 69 49.3
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 4.3e-10 67.8 68 63.2
CSS0047514 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 7.4e-10 67.0 79 54.4
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 7.4e-10 67.0 83 45.8
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 7.4e-10 67.0 75 50.7
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 7.4e-10 67.0 79 49.4
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 9.6e-10 66.6 79 50.6
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 9.6e-10 66.6 74 54.1
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 1.3e-09 66.2 77 53.2
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 1.3e-09 66.2 77 53.2
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.3e-09 66.2 68 61.8
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.6e-09 65.9 69 53.6
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.6e-09 65.9 79 54.4
Ca_03672_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 1.6e-09 65.9 80 52.5
ECA236G0309 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.6e-09 65.9 82 51.2
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.1e-09 65.5 60 68.3
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.7e-09 64.7 79 54.4
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 3.7e-09 64.7 78 50.0
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 4.8e-09 64.3 79 55.7
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 4.8e-09 64.3 75 49.3
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 4.8e-09 64.3 75 56.0
Oeu012375.1 Olea europaea HOM05D002385 ORTHO05D002245 6.2e-09 63.9 78 50.0
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 6.2e-09 63.9 83 53.0
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 8.1e-09 63.5 75 49.3
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 8.1e-09 63.5 79 48.1
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 1.1e-08 63.2 75 53.3
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 1.1e-08 63.2 89 56.2
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.1e-08 63.2 75 54.7
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 1.1e-08 63.2 75 56.0
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 1.8e-08 62.4 71 56.3
CSS0045060 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 1.8e-08 62.4 79 51.9
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 1.8e-08 62.4 68 58.8
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 1.8e-08 62.4 74 56.8
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 1.8e-08 62.4 88 40.9
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 1.8e-08 62.4 82 48.8
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.8e-08 62.4 76 53.9
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.8e-08 62.4 76 53.9
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 2.4e-08 62.0 67 55.2
QL04p061357 Quercus lobata HOM05D002385 ORTHO05D002245 2.4e-08 62.0 74 56.8
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 3.1e-08 61.6 69 47.8
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 3.1e-08 61.6 54 68.5
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.1e-08 61.6 73 45.2
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 4.0e-08 61.2 64 56.2
Glyma.08G171300 Glycine max HOM05D002385 ORTHO05D002245 5.3e-08 60.8 64 51.6
unitig_699.g19631 Utricularia gibba HOM05D002385 ORTHO05D002245 5.3e-08 60.8 76 52.6
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 5.3e-08 60.8 81 50.6
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 6.9e-08 60.5 68 54.4
Sed0023256 Sechium edule HOM05D002385 ORTHO05D002245 6.9e-08 60.5 61 45.9
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 9.0e-08 60.1 72 58.3
Prupe.6G185500 Prunus persica HOM05D002385 ORTHO05D002245 9.0e-08 60.1 84 47.6
Prupe.6G185600 Prunus persica HOM05D002385 ORTHO05D002245 9.0e-08 60.1 57 57.9
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 9.0e-08 60.1 67 47.8
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 1.2e-07 59.7 57 64.9
Prupe.6G185400 Prunus persica HOM05D002385 ORTHO05D002245 1.2e-07 59.7 54 61.1
RcHm_v2.0_Chr2g0114521 Rosa chinensis HOM05D002385 ORTHO05D002245 1.2e-07 59.7 76 47.4
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 1.5e-07 59.3 64 48.4
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 1.5e-07 59.3 79 44.3
Duzib133G1087 Durio zibethinus HOM05D002385 ORTHO05D002245 1.5e-07 59.3 78 51.3
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.5e-07 59.3 83 50.6
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.5e-07 59.3 83 50.6
PGSC0003DMG400019578 Solanum tuberosum HOM05D002385 ORTHO05D002245 1.5e-07 59.3 79 48.1
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 2.0e-07 58.9 94 42.6
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 2.0e-07 58.9 73 50.7
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.0e-07 58.9 75 53.3
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 2.6e-07 58.5 79 44.3
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 2.6e-07 58.5 77 51.9
RcHm_v2.0_Chr2g0114501 Rosa chinensis HOM05D002385 ORTHO05D002245 2.6e-07 58.5 60 56.7
CiPaw.11G059900 Carya illinoinensis HOM05D002385 ORTHO05D002245 3.4e-07 58.2 96 36.5
FAN26G3044 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.4e-07 58.2 62 53.2
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 3.4e-07 58.2 65 55.4
vmacro12336 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 3.4e-07 58.2 85 50.6
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.5e-07 57.8 76 53.9
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 5.8e-07 57.4 79 43.0
Cc05_g00090 Coffea canephora HOM05D002385 ORTHO05D002245 5.8e-07 57.4 76 51.3
FvH4_6g39680 Fragaria vesca HOM05D002385 ORTHO05D002245 5.8e-07 57.4 61 57.4
FAN02G0915 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.8e-07 57.4 61 57.4
FAN05G4252 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.8e-07 57.4 61 57.4
FAN14G2541 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.8e-07 57.4 61 57.4
Glyma.13G003300 Glycine max HOM05D002385 ORTHO05D002245 7.6e-07 57.0 71 53.5
RcHm_v2.0_Chr2g0153741 Rosa chinensis HOM05D002385 ORTHO05D002245 7.6e-07 57.0 60 55.0
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 7.6e-07 57.0 81 49.4
MELO3C012630.2 Cucumis melo HOM05D002385 ORTHO05D002245 9.9e-07 56.6 71 45.1
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 1.3e-06 56.2 61 63.9
Gohir.A07G184100 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.3e-06 56.2 83 49.4
Gorai.001G092800 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.3e-06 56.2 84 54.8
RcHm_v2.0_Chr2g0153701 Rosa chinensis HOM05D002385 ORTHO05D002245 1.3e-06 56.2 70 51.4
Sopen05g012340 Solanum pennellii HOM05D002385 ORTHO05D002245 1.3e-06 56.2 79 48.1
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 1.7e-06 55.8 58 51.7
CsaV3_7G022690 Cucumis sativus L. HOM05D002385 ORTHO05D002245 1.7e-06 55.8 71 45.1
DCAR_016934 Daucus carota HOM05D002385 ORTHO05D002245 1.7e-06 55.8 52 63.5
HanXRQChr03g0078081 Helianthus annuus HOM05D002385 ORTHO05D002245 1.7e-06 55.8 79 50.6
Nitab4.5_0003177g0010 Nicotiana tabacum HOM05D002385 ORTHO05D002245 1.7e-06 55.8 79 50.6
Solyc05g016060.4 Solanum lycopersicum HOM05D002385 ORTHO05D002245 1.7e-06 55.8 80 50.0
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.2e-06 55.5 61 63.9
CiPaw.11G059800 Carya illinoinensis HOM05D014462 ORTHO05D018947 2.2e-06 55.5 83 39.8
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 2.2e-06 55.5 61 63.9
Gohir.D07G086800 Gossypium hirsutum HOM05D002385 ORTHO05D002245 2.2e-06 55.5 83 51.8
Lj6g0002718 Lotus japonicus HOM05D002385 ORTHO05D002245 2.2e-06 55.5 67 55.2
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 2.2e-06 55.5 90 40.0
FvH4_1g21001 Fragaria vesca HOM05D002385 ORTHO05D002245 2.9e-06 55.1 75 50.7
FvH4_6g39660 Fragaria vesca HOM05D002385 ORTHO05D002245 2.9e-06 55.1 60 55.0
Glyma.08G171000 Glycine max HOM05D002385 ORTHO05D002245 2.9e-06 55.1 63 47.6
FAN14G3003 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.8e-06 54.7 60 56.7
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 3.8e-06 54.7 80 45.0
Thhalv10009262m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 4.9e-06 54.3 79 40.5
FAN23G3060 Fragaria x ananassa HOM05D002385 ORTHO05D002245 4.9e-06 54.3 52 57.7
RcHm_v2.0_Chr2g0153751 Rosa chinensis HOM05D002385 ORTHO05D002245 6.4e-06 53.9 75 46.7


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