Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 5.4e-113 411.0 205 100.0
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.4e-106 387.5 205 95.1
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 6.4e-106 387.5 206 94.2
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.5e-102 376.3 205 90.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.8e-100 369.4 205 87.8
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 1.4e-97 359.8 205 86.8
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 3.2e-97 358.6 205 87.3
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.7e-95 352.8 205 84.4
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.9e-94 349.4 205 83.9
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.1e-92 343.6 205 81.5
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 9.9e-91 337.0 202 79.2
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 3.3e-86 322.0 201 75.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 4.3e-86 321.6 233 68.7
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 5.6e-86 321.2 202 76.7
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 2.8e-85 318.9 203 74.9
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 4.8e-85 318.2 201 74.1
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 8.1e-85 317.4 201 74.1
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.4e-84 316.6 201 78.6
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.5e-83 313.2 207 73.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 2.6e-83 312.4 201 73.6
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 4.5e-83 311.6 201 74.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 7.6e-83 310.8 201 75.1
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 9.9e-83 310.5 201 73.6
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 3.8e-82 308.5 201 72.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 3.8e-82 308.5 201 75.6
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 3.8e-82 308.5 201 73.1
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 4.9e-82 308.1 202 73.3
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 4.9e-82 308.1 208 74.5
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 4.9e-82 308.1 196 74.0
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 4.9e-82 308.1 196 74.0
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 4.9e-82 308.1 201 74.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 6.4e-82 307.8 196 74.0
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.4e-81 306.6 201 73.1
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.1e-80 302.8 203 74.4
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 4.6e-80 301.6 197 72.1
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.0e-79 300.4 191 74.9
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 6.7e-79 297.7 209 71.3
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 6.7e-79 297.7 205 70.7
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 8.7e-79 297.4 203 69.0
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 1.9e-78 296.2 202 70.3
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.9e-78 296.2 196 70.9
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.9e-78 296.2 201 70.6
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 3.3e-78 295.4 200 72.5
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 7.4e-78 294.3 202 67.3
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.3e-77 293.5 205 71.7
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.3e-77 293.5 193 73.1
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.6e-77 293.1 203 70.9
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 3.6e-77 292.0 202 66.8
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 4.8e-77 291.6 191 73.3
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 4.8e-77 291.6 201 69.7
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 6.2e-77 291.2 202 66.3
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 3.1e-76 288.9 199 67.3
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.1e-76 288.9 221 65.6
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.0e-76 288.5 201 68.7
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 5.3e-76 288.1 194 73.7
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 5.3e-76 288.1 201 68.7
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 5.3e-76 288.1 191 73.3
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 9.9e-75 283.9 218 64.7
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.7e-74 283.1 200 65.0
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.2e-74 282.7 191 69.1
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 3.2e-73 278.9 197 66.0
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 4.2e-73 278.5 197 66.5
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 7.1e-73 277.7 217 63.6
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 2.7e-72 275.8 175 74.9
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 7.9e-72 274.2 198 64.6
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.0e-71 272.3 180 71.7
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 5.1e-71 271.6 198 67.7
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.5e-70 270.0 190 67.4
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 7.4e-70 267.7 206 67.5
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 3.7e-69 265.4 205 62.4
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 3.7e-69 265.4 198 64.1
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 2.0e-67 259.6 198 59.1
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 2.2e-66 256.1 201 60.7
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.2e-66 256.1 189 64.6
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.4e-65 253.4 190 64.2
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 2.5e-65 252.7 164 71.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 8.7e-63 244.2 192 65.1
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 8.7e-63 244.2 201 63.2
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 2.8e-61 239.2 191 60.2
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 6.9e-60 234.6 156 71.2
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.3e-58 230.3 202 57.4
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 3.2e-57 225.7 156 68.6
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 6.1e-56 221.5 156 67.9
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.8e-55 219.9 191 57.1
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 6.1e-48 194.9 125 72.8
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 6.1e-48 194.9 125 72.8
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.4e-44 183.7 201 49.3
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.4e-44 183.0 137 66.4
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 2.4e-44 183.0 131 67.2
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 2.2e-42 176.4 188 47.9
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 9.4e-41 171.0 146 61.0
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.4e-39 167.2 164 54.9
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 8.8e-39 164.5 188 44.7
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.6e-38 162.9 168 52.4
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 2.6e-38 162.9 189 43.9
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 7.0e-36 154.8 126 63.5
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 2.0e-35 153.3 187 40.1
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.9e-33 146.7 132 53.8
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.6e-32 142.5 161 55.9
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.8e-31 140.2 180 44.4
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.8e-26 122.5 115 55.7
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 8.5e-26 121.3 127 44.1
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.6e-24 115.9 63 79.4
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.8e-23 113.6 88 65.9
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 5.7e-22 108.6 84 59.5
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 3.1e-20 102.8 87 62.1
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 3.1e-20 102.8 159 42.8
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.6e-19 100.5 76 64.5
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 4.2e-17 92.4 107 53.3
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 5.5e-17 92.0 191 32.5
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 8.0e-16 88.2 63 63.5
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 6.3e-13 78.6 62 61.3
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 1.2e-11 74.3 37 97.3
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 3.5e-11 72.8 40 75.0
SMO201G0213 Selaginella moellendorffii HOM05D004675 ORTHO05D005631 6.8e-07 58.5 152 25.7
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 8.9e-07 58.2 53 50.9


User provided reference genes

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