Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9726 Trifolium pratense HOM05D004693 ORTHO05D005545 1.8e-136 489.2 243 100.0
Psat3g205360 Pisum sativum HOM05D004693 ORTHO05D005545 2.4e-120 435.6 243 88.9
Ca_04048_v3 Cicer arietinum L. HOM05D004693 ORTHO05D005545 1.6e-116 422.9 243 86.4
Medtr7g007280 Medicago truncatula HOM05D004693 ORTHO05D005545 2.1e-116 422.5 243 86.4
Lj1g0002546 Lotus japonicus HOM05D004693 ORTHO05D005545 1.6e-100 369.8 243 76.1
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea HOM05D004693 ORTHO05D005545 5.8e-98 361.3 247 73.7
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea HOM05D004693 ORTHO05D005545 5.8e-98 361.3 247 73.7
Glyma.18G296600 Glycine max HOM05D004693 ORTHO05D005545 2.2e-97 359.4 244 75.8
Glyma.08G365700 Glycine max HOM05D004693 ORTHO05D005545 3.0e-94 349.0 244 73.0
VMungo1383G0350 Vigna mungo HOM05D004693 ORTHO05D005545 2.1e-92 342.8 251 70.5
Phvul.008G005900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 1.4e-91 340.1 251 70.5
Phvul.007G143200 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 4.5e-90 335.1 251 70.9
Lalb_Chr17g0335881 Lupinus albus HOM05D004693 ORTHO05D005545 2.3e-86 322.8 249 69.9
Glyma.19G047800 Glycine max HOM05D004693 ORTHO05D005545 1.3e-84 317.0 252 67.9
Medtr6g025680 Medicago truncatula HOM05D004693 ORTHO05D005545 3.1e-83 312.4 244 64.3
Medtr6g018550 Medicago truncatula HOM05D004693 ORTHO05D005545 2.2e-81 306.2 246 63.8
TPR.G32451 Trifolium pratense HOM05D004693 ORTHO05D005545 8.4e-81 304.3 246 64.6
Lj2g0008970 Lotus japonicus HOM05D004693 ORTHO05D005545 1.3e-78 297.0 244 64.3
Lalb_Chr21g0317811 Lupinus albus HOM05D004693 ORTHO05D005545 8.7e-78 294.3 248 61.7
MD00G1132400 Malus domestica HOM05D004693 ORTHO05D005545 9.6e-77 290.8 245 59.6
Manes.02G068600 Manihot esculenta HOM05D004693 ORTHO05D005545 9.0e-75 284.3 251 56.6
Prupe.5G053500 Prunus persica HOM05D004693 ORTHO05D005545 1.2e-74 283.9 243 60.1
Ciclev10012575m.g Citrus clementina HOM05D004693 ORTHO05D005545 2.6e-74 282.7 236 61.0
GSVIVG01031023001 Vitis vinifera HOM05D004693 ORTHO05D005545 3.8e-73 278.9 249 56.2
CANSAT78G0919 Cannabis sativa HOM05D004693 ORTHO05D005545 4.9e-73 278.5 234 60.3
Actinidia15883 Actinidia chinensis HOM05D004693 ORTHO05D005545 6.5e-73 278.1 234 59.8
RcHm_v2.0_Chr7g0206351 Rosa chinensis HOM05D004693 ORTHO05D005545 1.1e-72 277.3 241 57.3
FvH4_5g20670 Fragaria vesca HOM05D004693 ORTHO05D005545 5.5e-72 275.0 245 57.1
MD09G1253000 Malus domestica HOM05D004693 ORTHO05D005545 5.5e-72 275.0 238 58.0
Potri.004G099500 Populus trichocarpa HOM05D004693 ORTHO05D005545 5.5e-72 275.0 248 54.8
TWI77G0167 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 1.2e-71 273.9 248 56.5
MD06G1045700 Malus domestica HOM05D004693 ORTHO05D005545 1.6e-71 273.5 242 57.4
Dinv33946 Davidia involucrata HOM05D004693 ORTHO05D005545 6.1e-71 271.6 202 63.4
TAR629G3320 Trochodendron aralioides HOM05D004693 ORTHO05D005545 6.1e-71 271.6 211 62.6
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla HOM05D004693 ORTHO05D005545 5.1e-70 268.5 211 60.7
Thecc.04G133900 Theobroma cacao HOM05D004693 ORTHO05D005545 6.7e-70 268.1 190 65.3
Atru.chr1.1699 Acer truncatum HOM05D004693 ORTHO05D005545 8.7e-70 267.7 234 58.1
ClCG05G011670 Citrullus lanatus HOM05D004693 ORTHO05D005545 8.7e-70 267.7 231 61.0
Sed0027829 Sechium edule HOM05D004693 ORTHO05D005545 8.7e-70 267.7 242 58.3
CsaV3_3G020700 Cucumis sativus L. HOM05D004693 ORTHO05D005545 1.5e-69 266.9 231 60.6
Gohir.A12G053800 Gossypium hirsutum HOM05D004693 ORTHO05D005545 1.5e-69 266.9 249 55.0
Gorai.008G055600 Gossypium raimondii HOM05D004693 ORTHO05D005545 1.5e-69 266.9 249 55.0
Prupe.3G157500 Prunus persica HOM05D004693 ORTHO05D005545 1.5e-69 266.9 240 56.7
Nn4g23871 Nelumbo nucifera HOM05D004693 ORTHO05D005545 1.9e-69 266.5 244 56.1
Gohir.D12G052500 Gossypium hirsutum HOM05D004693 ORTHO05D005545 2.5e-69 266.2 249 55.0
TWI53G0853 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 1.3e-68 263.8 253 54.9
TAR371G1203 Trochodendron aralioides HOM05D004693 ORTHO05D005545 1.3e-68 263.8 211 62.6
PGR004G1354 Punica granatum HOM05D004693 ORTHO05D005545 2.2e-68 263.1 181 68.0
vmacro05556 Vaccinium macrocarpon HOM05D004693 ORTHO05D005545 3.7e-68 262.3 247 53.8
Sed0014747 Sechium edule HOM05D004693 ORTHO05D005545 1.4e-67 260.4 229 58.1
Lj2A442G45 Lonicera japonica HOM05D004693 ORTHO05D005545 1.8e-67 260.0 221 57.0
Sabra17G0095200 Salix brachista HOM05D004693 ORTHO05D005545 1.8e-67 260.0 223 58.7
Nn3g17869 Nelumbo nucifera HOM05D004693 ORTHO05D005545 4.1e-67 258.8 185 67.0
Eucgr.F02496 Eucalyptus grandis HOM05D004693 ORTHO05D005545 5.3e-67 258.5 233 53.6
Thhalv10019078m.g Eutrema salsugineum HOM05D004693 ORTHO05D005545 5.3e-67 258.5 238 54.6
A02p13930 Brassica napus HOM05D004693 ORTHO05D005545 9.0e-67 257.7 184 66.3
BraA02t06454Z Brassica rapa HOM05D004693 ORTHO05D005545 9.0e-67 257.7 184 66.3
Sp5g22010 Schrenkiella parvula HOM05D004693 ORTHO05D005545 4.5e-66 255.4 198 63.1
HanXRQChr12g0376541 Helianthus annuus HOM05D004693 ORTHO05D005545 1.3e-65 253.8 243 53.9
Sed0024744 Sechium edule HOM05D004693 ORTHO05D005545 1.3e-65 253.8 178 68.0
BcaC03g14797 Brassica carinata HOM05D004693 ORTHO05D005545 2.2e-65 253.1 187 65.2
C02p22440 Brassica napus HOM05D004693 ORTHO05D005545 2.2e-65 253.1 187 65.2
BolC2t08398H Brassica oleracea HOM05D004693 ORTHO05D005545 2.2e-65 253.1 187 65.2
THA.LOC104805567 Tarenaya hassleriana HOM05D004693 ORTHO05D005545 2.2e-65 253.1 241 56.0
Aa31LG2G3480 Aethionema arabicum HOM05D004693 ORTHO05D005545 2.9e-65 252.7 239 56.1
Lsat_1_v5_gn_3_79761 Lactuca sativa HOM05D004693 ORTHO05D005545 1.4e-64 250.4 242 54.1
PSO478G2919 Papaver somniferum HOM05D004693 ORTHO05D005545 1.4e-64 250.4 234 58.1
CARHR059530 Cardamine hirsuta HOM05D004693 ORTHO05D005545 1.9e-64 250.0 237 55.7
FAN13G1234 Fragaria x ananassa HOM05D004693 ORTHO05D005545 1.9e-64 250.0 275 50.2
Actinidia36320 Actinidia chinensis HOM05D004693 ORTHO05D005545 9.4e-64 247.7 184 67.4
DCAR_017191 Daucus carota HOM05D004693 ORTHO05D005545 9.4e-64 247.7 220 57.7
Carub.0002s1337 Capsella rubella HOM05D004693 ORTHO05D005545 4.6e-63 245.4 205 60.0
AL2G25440 Arabidopsis lyrata HOM05D004693 ORTHO05D005545 6.1e-63 245.0 201 59.7
AT1G67080 Arabidopsis thaliana HOM05D004693 ORTHO05D005545 7.9e-63 244.6 197 59.9
PSO017G3734 Papaver somniferum HOM05D004693 ORTHO05D005545 7.9e-63 244.6 190 64.7
Potri.017G114900 Populus trichocarpa HOM05D004693 ORTHO05D005545 7.9e-63 244.6 210 59.0
BcaB05g24236 Brassica carinata HOM05D004693 ORTHO05D005545 1.0e-62 244.2 191 60.7
Sopen02g030740 Solanum pennellii HOM05D004693 ORTHO05D005545 1.8e-62 243.4 247 51.0
ATR1125G077 Amborella trichopoda HOM05D004693 ORTHO05D005545 3.0e-62 242.7 177 65.0
Oeu010266.2 Olea europaea HOM05D004693 ORTHO05D005545 3.9e-62 242.3 176 64.2
MSTRG.23575 Avicennia marina HOM05D004693 ORTHO05D005545 5.1e-62 241.9 251 49.8
CAN.G225.4 Capsicum annuum HOM05D004693 ORTHO05D005545 5.1e-62 241.9 244 48.4
MSTRG.15294 Avicennia marina HOM05D004693 ORTHO05D005545 6.7e-62 241.5 209 54.5
Solyc02g063170.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 8.8e-62 241.1 207 55.1
ECA246G3075 Erigeron canadensis HOM05D004693 ORTHO05D005545 1.1e-61 240.7 237 52.7
Sopen02g014240 Solanum pennellii HOM05D004693 ORTHO05D005545 3.3e-61 239.2 207 55.1
PGSC0003DMG401026407 Solanum tuberosum HOM05D004693 ORTHO05D005545 3.3e-61 239.2 247 51.0
QL02p051402 Quercus lobata HOM05D004693 ORTHO05D005545 4.3e-61 238.8 146 78.8
PGSC0003DMG400024184 Solanum tuberosum HOM05D004693 ORTHO05D005545 4.3e-61 238.8 207 54.6
DCAR_025914 Daucus carota HOM05D004693 ORTHO05D005545 7.4e-61 238.0 177 63.3
Peaxi162Scf00501g00318 Petunia axillaris HOM05D004693 ORTHO05D005545 9.7e-61 237.7 212 55.2
Nitab4.5_0001217g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 4.8e-60 235.3 238 50.4
Solyc02g086050.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.1e-59 234.2 241 50.6
Hund13716 Selenicereus undatus HOM05D004693 ORTHO05D005545 4.1e-59 232.3 180 64.4
Cc07_g08830 Coffea canephora HOM05D004693 ORTHO05D005545 5.9e-58 228.4 244 49.2
Nitab4.5_0004398g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.3e-57 227.3 234 48.7
VMungo0464G1881 Vigna mungo HOM05D004693 ORTHO05D005545 5.0e-57 225.3 199 62.3
AUR62009000 Chenopodium quinoa HOM05D004693 ORTHO05D005545 1.4e-56 223.8 168 64.3
HPP92_021861 Vanilla planifolia HOM05D004693 ORTHO05D005545 1.9e-56 223.4 180 56.7
Migut.H00217 Erythranthe guttata HOM05D004693 ORTHO05D005545 5.5e-56 221.9 237 52.3
SGA_v2.0_scaffold115G32108 Striga asiatica HOM05D000286 ORTHO05D000170 9.4e-56 221.1 181 58.0
Ah.16g101760 Amaranthus hybridus HOM05D004693 ORTHO05D005545 1.2e-55 220.7 150 70.0
CAN.G625.24 Capsicum annuum HOM05D004693 ORTHO05D005545 6.1e-55 218.4 208 53.4
AUR62023302 Chenopodium quinoa HOM05D004693 ORTHO05D005545 6.1e-55 218.4 149 67.8
Sabra04G0080500 Salix brachista HOM05D004693 ORTHO05D005545 1.8e-54 216.9 236 49.6
Os01g0128300 Oryza sativa ssp. japonica HOM05D004693 ORTHO05D005545 1.5e-53 213.8 145 66.9
unitig_32.g11889 Utricularia gibba HOM05D004693 ORTHO05D005545 2.6e-53 213.0 179 55.3
SalBow3G4509 Salvia bowleyana HOM05D004693 ORTHO05D005545 4.4e-53 212.2 162 61.1
SalBow5G5330 Salvia bowleyana HOM05D004693 ORTHO05D005545 5.7e-53 211.8 164 63.4
COL.COLO4_09328 Corchorus olitorius HOM05D004693 ORTHO05D005545 7.4e-53 211.5 135 73.3
Psat1g081400 Pisum sativum HOM05D004693 ORTHO05D005545 1.3e-52 210.7 163 68.1
Nitab4.5_0000659g0050 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.7e-52 210.3 146 68.5
Nitab4.5_0000912g0240 Nicotiana tabacum HOM05D004693 ORTHO05D005545 3.7e-52 209.1 154 65.6
Sopen03g007020 Solanum pennellii HOM05D004693 ORTHO05D005545 4.8e-52 208.8 188 51.1
Solyc03g034240.4 Solanum lycopersicum HOM05D004693 ORTHO05D005545 6.3e-52 208.4 183 53.0
Eucgr.F02495 Eucalyptus grandis HOM05D004693 ORTHO05D005545 1.1e-51 207.6 152 62.5
Migut.L00317 Erythranthe guttata HOM05D004693 ORTHO05D005545 5.3e-51 205.3 144 66.7
PGSC0003DMG402019589 Solanum tuberosum HOM05D004693 ORTHO05D005545 5.3e-51 205.3 179 53.6
unitig_748.g8751 Utricularia gibba HOM05D004693 ORTHO05D005545 2.0e-50 203.4 179 56.4
MELO3C023805.2 Cucumis melo HOM05D004693 ORTHO05D005545 2.6e-50 203.0 120 81.7
Zm00001eb335080 Zea mays HOM05D004693 ORTHO05D005545 7.7e-50 201.4 140 65.7
Nitab4.5_0002207g0070 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.0e-49 201.1 195 50.8
Zm00001eb125470 Zea mays HOM05D004693 ORTHO05D005545 1.3e-49 200.7 140 65.0
Aqoxy3G00271 Aquilegia oxysepala HOM05D004693 ORTHO05D005545 1.7e-49 200.3 166 61.4
EL10Ac2g04567 Beta vulgaris HOM05D004693 ORTHO05D005545 5.0e-49 198.7 181 55.2
SEGI_37456 Sequoiadendron giganteum HOM05D004693 ORTHO05D005545 5.0e-49 198.7 180 55.0
Pp3c12_21540 Physcomitrium patens HOM05D004693 ORTHO05D005545 1.8e-46 190.3 182 52.7
HanXRQChr15g0471501 Helianthus annuus HOM05D004693 ORTHO05D005545 6.7e-46 188.3 194 50.5
Pp3c3_37490 Physcomitrium patens HOM05D004693 ORTHO05D005545 8.2e-44 181.4 144 58.3
HPP92_000177 Vanilla planifolia HOM05D004693 ORTHO05D005545 5.3e-43 178.7 168 54.8
Mapoly0134s0007 Marchantia polymorpha HOM05D004693 ORTHO05D005545 7.0e-43 178.3 188 48.9
SMO356G0314 Selaginella moellendorffii HOM05D004693 ORTHO05D005545 1.6e-42 177.2 139 58.3
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis HOM05D004693 ORTHO05D005545 2.6e-42 176.4 147 56.5
Cpa.g.sc282.10 Carica papaya HOM05D004693 ORTHO05D005545 1.5e-40 170.6 170 53.5
Duzib133G0419 Durio zibethinus HOM05D004693 ORTHO05D005545 2.5e-40 169.9 202 44.1
Peaxi162Scf00394g00618 Petunia axillaris HOM05D004693 ORTHO05D005545 3.2e-40 169.5 246 40.7
SGA_v2.0_scaffold33G13498 Striga asiatica HOM05D004693 ORTHO05D005545 6.1e-39 165.2 196 45.9
Phvul.004G065900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 1.8e-38 163.7 174 56.3
Nitab4.5_0002207g0120 Nicotiana tabacum HOM05D004693 ORTHO05D005545 4.5e-34 149.1 199 39.7
CiPaw.04G042100 Carya illinoinensis HOM05D000286 ORTHO05D000170 5.9e-34 148.7 145 57.2
CDE12G0456 Ceratophyllum demersum HOM05D001541 ORTHO05D001465 3.8e-33 146.0 172 47.7
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 3.6e-31 139.4 142 53.5
MD06G1045600 Malus domestica HOM05D004693 ORTHO05D005545 1.3e-25 120.9 154 46.1
Peaxi162Scf00205g00220 Petunia axillaris HOM05D004693 ORTHO05D005545 1.1e-24 117.9 129 46.5
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis HOM05D004693 ORTHO05D005545 2.6e-21 106.7 79 63.3
MCO01G364 Micromonas commoda HOM05D004693 ORTHO05D005545 5.4e-19 99.0 160 33.8
PRCOL_00000715 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.0e-17 94.7 148 35.1
MCO02G342 Micromonas commoda HOM05D004693 ORTHO05D005545 1.2e-15 87.8 132 34.1
VMungo0251G1321 Vigna mungo HOM05D000154 ORTHO05D000092 1.7e-12 77.4 83 54.2
Cre06.g255300 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 3.7e-12 76.3 153 30.1
PRCOL_00000440 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 5.4e-11 72.4 163 31.3
Nitab4.5_0007808g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.6e-10 70.9 82 40.2
Cre03.g207000 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 6.0e-10 68.9 133 31.6
CDE06G0519 Ceratophyllum demersum HOM05D004693 ORTHO05D005545 7.3e-08 62.0 59 52.5
PRCOL_00005350 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 7.3e-08 62.0 127 24.4
Nitab4.5_0009855g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.1e-07 60.5 80 43.8


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