Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9703 Trifolium pratense HOM05D007426 ORTHO05D009167 1.9e-65 254.6 298 100.0
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 9.4e-12 76.3 46 69.6
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 8.0e-11 73.2 87 44.8
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 4.0e-10 70.9 44 70.5
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 3.4e-09 67.8 40 75.0
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 1.7e-08 65.5 37 78.4
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 6.3e-08 63.5 79 43.0
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 6.3e-08 63.5 44 63.6
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 6.3e-08 63.5 88 42.0
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 6.3e-08 63.5 47 59.6
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 5.4e-07 60.5 43 58.1
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 5.4e-07 60.5 43 58.1
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 9.1e-07 59.7 58 48.3
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 1.6e-06 58.9 38 63.2
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 2.0e-06 58.5 43 55.8
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 2.0e-06 58.5 58 46.6
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 3.5e-06 57.8 43 60.5
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 4.5e-06 57.4 47 55.3
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 4.5e-06 57.4 47 55.3
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 5.9e-06 57.0 43 58.1
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 5.9e-06 57.0 43 55.8
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 7.7e-06 56.6 43 58.1
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 7.7e-06 56.6 44 54.5
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 7.7e-06 56.6 58 44.8


User provided reference genes

Program Settings