Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 3.1e-254 881.3 456 100.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.1e-186 656.0 428 80.1
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 2.8e-186 655.6 433 80.1
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.0e-180 635.6 434 78.8
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.3e-148 529.6 442 65.4
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 2.6e-144 516.2 436 65.1
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 5.9e-144 515.0 438 64.8
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 2.8e-138 496.1 379 69.9
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 3.7e-138 495.7 445 61.1
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 7.0e-137 491.5 378 69.3
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.2e-136 490.7 441 63.7
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.0e-131 473.4 408 64.7
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.6e-125 453.8 441 59.9
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.2e-122 443.4 434 56.9
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.8e-121 440.3 351 64.7
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.6e-120 437.2 429 57.3
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 3.5e-120 436.0 438 57.3
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.3e-119 434.1 462 54.8
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 8.6e-119 431.4 419 57.8
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.5e-118 430.6 432 57.9
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.9e-118 430.3 378 62.2
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 2.5e-118 429.9 418 57.4
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 9.5e-118 427.9 424 56.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 8.0e-117 424.9 419 56.3
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 3.0e-116 422.9 419 57.3
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 5.2e-116 422.2 446 54.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 1.2e-115 421.0 438 55.9
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.2e-115 421.0 429 55.9
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-115 420.6 414 57.5
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.4e-114 415.2 442 54.1
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 3.2e-113 412.9 407 55.8
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 9.2e-113 411.4 510 47.8
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 9.2e-113 411.4 450 53.1
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 3.5e-112 409.5 462 53.5
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 3.5e-112 409.5 375 59.7
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 4.6e-112 409.1 445 53.5
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 6.6e-111 405.2 369 59.9
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.6e-111 404.8 414 55.6
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.3e-110 402.9 461 54.4
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 5.6e-110 402.1 450 52.9
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 7.3e-110 401.7 379 58.3
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 9.5e-110 401.4 456 52.6
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 2.1e-109 400.2 463 52.3
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.8e-109 399.8 495 50.1
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 3.6e-109 399.4 351 59.3
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 8.0e-109 398.3 390 54.9
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.1e-108 396.4 366 57.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 6.8e-108 395.2 486 49.2
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 4.4e-107 392.5 476 49.6
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 5.8e-107 392.1 426 52.6
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 5.8e-107 392.1 455 51.9
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 7.5e-107 391.7 422 52.8
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 9.8e-107 391.3 460 51.7
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.3e-106 391.0 445 50.3
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.3e-106 391.0 440 51.8
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.7e-106 390.6 463 51.8
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 8.3e-106 388.3 320 62.8
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.4e-105 386.7 422 52.4
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 2.4e-105 386.7 295 65.8
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 3.2e-105 386.3 372 56.7
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.0e-104 383.6 302 64.2
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 3.5e-104 382.9 456 49.6
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.7e-103 380.6 417 51.8
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.7e-103 380.6 431 50.8
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 6.6e-103 378.6 383 53.5
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 7.3e-102 375.2 431 51.0
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.6e-101 374.0 322 60.6
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.8e-101 373.2 377 54.4
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 6.2e-101 372.1 322 60.6
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 6.2e-101 372.1 322 60.6
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 8.1e-101 371.7 375 55.7
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.1e-100 371.3 438 49.1
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 6.8e-100 368.6 454 48.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.0e-99 367.1 608 41.0
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 2.0e-99 367.1 427 50.8
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 4.4e-99 365.9 326 58.6
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.5e-99 365.2 330 56.7
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 7.5e-99 365.2 416 51.4
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 3.7e-98 362.8 387 52.2
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.9e-97 360.5 312 60.3
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 6.0e-96 355.5 377 53.1
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 7.8e-96 355.1 397 52.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 3.0e-95 353.2 440 49.1
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 8.6e-95 351.7 572 41.8
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-94 350.9 325 55.4
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 5.6e-94 349.0 336 54.8
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 7.3e-94 348.6 427 49.2
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 1.2e-93 347.8 303 58.7
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 8.1e-93 345.1 351 52.7
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.4e-92 344.4 301 58.8
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 9.9e-91 338.2 358 55.3
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.3e-90 337.8 343 54.5
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.7e-90 337.4 300 58.0
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.8e-90 336.3 442 46.6
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.9e-89 334.0 440 45.5
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.2e-89 333.2 368 50.0
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.1e-89 332.8 369 51.8
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.4e-89 332.4 411 49.4
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 7.1e-89 332.0 331 55.0
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 7.1e-89 332.0 344 54.4
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.2e-88 331.3 456 44.7
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.6e-88 330.9 456 45.0
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 2.7e-88 330.1 456 45.0
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 6.0e-88 328.9 441 47.6
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.0e-87 328.2 443 48.1
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.3e-87 327.8 432 47.2
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 2.3e-87 327.0 362 52.8
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.3e-87 327.0 396 48.7
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 2.3e-87 327.0 362 52.8
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.3e-87 327.0 396 48.7
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 3.9e-87 326.2 363 52.6
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 6.6e-87 325.5 299 58.5
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 4.0e-84 316.2 334 51.8
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.9e-83 311.6 464 41.4
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.4e-82 308.9 386 48.4
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 8.4e-82 308.5 275 57.5
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.1e-81 308.1 312 51.6
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 9.3e-81 305.1 330 53.0
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.2e-80 304.7 326 51.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 4.6e-80 302.8 304 51.3
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.3e-79 300.4 331 52.3
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.9e-79 299.7 310 50.6
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.5e-78 297.7 362 43.9
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 9.6e-78 295.0 407 44.0
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.4e-73 281.2 305 54.4
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-71 274.6 211 65.4
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-66 258.1 355 45.4
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.3e-66 258.1 283 49.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 7.1e-65 252.3 401 41.9
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.1e-60 236.9 283 49.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.3e-60 236.1 194 63.9
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 9.0e-60 235.3 227 57.3
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 2.6e-59 233.8 442 36.4
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.5e-57 226.1 239 52.3
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.6e-56 224.6 196 61.7
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 6.5e-50 202.6 277 45.1
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 2.7e-48 197.2 150 62.7
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.0e-42 178.7 383 33.4
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 1.5e-35 154.8 246 41.5
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.5e-35 153.7 117 68.4
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.0e-34 152.1 450 31.3
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 3.8e-34 150.2 310 33.9
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 2.9e-26 124.0 410 28.3
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 4.2e-25 120.2 201 34.3
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.6e-22 110.9 103 60.2
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.3e-21 108.6 233 34.8
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.5e-19 100.5 135 43.7
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 3.4e-14 84.0 91 52.7
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.4e-12 77.8 199 34.2
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.0e-07 62.4 48 60.4
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.0e-07 62.4 80 38.8
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 3.0e-07 60.8 107 32.7


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