Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9683 Trifolium pratense HOM05D024077 ORTHO05D009679 2.3e-62 241.9 110 100.0
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 2.8e-47 191.8 110 81.8
TPR.G9026 Trifolium pratense HOM05D013451 ORTHO05D009679 7.3e-32 140.6 147 46.9
TPR.G14615 Trifolium pratense HOM05D013451 ORTHO05D009679 3.7e-28 128.3 108 51.9
Ca_03505_v3 Cicer arietinum L. HOM05D008341 ORTHO05D009679 7.3e-24 114.0 108 48.1
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 9.9e-21 103.6 100 48.0
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 2.7e-18 95.5 116 43.1
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 1.0e-17 93.6 78 52.6
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.3e-17 92.4 103 42.7
Medtr4g055480 Medicago truncatula HOM05D024077 ORTHO05D009679 5.1e-17 91.3 106 41.5
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 3.6e-15 85.1 73 47.9
TPR.G40010 Trifolium pratense HOM05D013451 ORTHO05D009679 3.6e-15 85.1 71 50.7
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 4.7e-15 84.7 79 50.6
arahy.Tifrunner.gnm1.ann1.20XN21 Arachis hypogaea HOM05D030406 ORTHO05D009679 1.4e-14 83.2 107 38.3
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 2.4e-14 82.4 103 38.8
Medtr1g080830 Medicago truncatula HOM05D022703 ORTHO05D009679 3.1e-14 82.0 87 44.8
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 3.1e-14 82.0 73 46.6
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 6.9e-14 80.9 70 51.4
TWI18G0813 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.9e-14 80.9 97 37.1
Ah.13g072940 Amaranthus hybridus HOM05D000017 ORTHO05D007253 9.0e-14 80.5 103 39.8
Medtr1g088620 Medicago truncatula HOM05D000483 ORTHO05D000158 9.0e-14 80.5 89 44.9
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 4.4e-13 78.2 81 43.2
Medtr2g018850 Medicago truncatula HOM05D000017 ORTHO05D000013 7.6e-13 77.4 72 47.2
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-12 76.3 97 37.1
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-12 76.3 97 37.1
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-12 76.3 97 37.1
Dinv20712 Davidia involucrata HOM05D008341 ORTHO05D009679 3.8e-12 75.1 103 35.9
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 3.8e-12 75.1 97 37.1
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.9e-12 74.7 97 36.1
Medtr2g102960 Medicago truncatula HOM05D024077 ORTHO05D009679 6.4e-12 74.3 86 39.5
Ca_24094_v3 Cicer arietinum L. HOM05D008341 ORTHO05D009679 8.4e-12 73.9 80 42.5
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 8.4e-12 73.9 39 84.6
Dinv23640 Davidia involucrata HOM05D008341 ORTHO05D009679 1.1e-11 73.6 103 36.9
Dinv16753 Davidia involucrata HOM05D008341 ORTHO05D009679 1.4e-11 73.2 103 36.9
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 2.4e-11 72.4 103 35.0
Medtr6g463550 Medicago truncatula HOM05D024077 ORTHO05D009679 5.4e-11 71.2 79 40.5
Dinv10194 Davidia involucrata HOM05D000017 ORTHO05D009679 9.3e-11 70.5 103 35.0
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 1.6e-10 69.7 83 39.8
TWI18G0585 Tripterygium wilfordii HOM05D008341 ORTHO05D009679 2.7e-10 68.9 97 32.0
Dinv24632 Davidia involucrata HOM05D008341 ORTHO05D009679 1.7e-09 66.2 105 34.3
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 1.7e-09 66.2 114 34.2
Medtr3g072367 Medicago truncatula HOM05D024077 ORTHO05D009679 2.3e-09 65.9 56 51.8
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 3.9e-09 65.1 114 34.2
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 5.1e-09 64.7 114 34.2
Dinv44214 Davidia involucrata HOM05D007975 ORTHO05D010011 5.6e-08 61.2 85 36.5
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 7.3e-08 60.8 52 46.2
Dinv09635 Davidia involucrata HOM05D008341 ORTHO05D009679 9.6e-08 60.5 89 34.8
Dinv12769 Davidia involucrata HOM05D008341 ORTHO05D009679 2.8e-07 58.9 89 33.7
QL03p010991 Quercus lobata HOM05D000017 ORTHO05D000013 3.6e-07 58.5 123 30.9
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 4.8e-07 58.2 50 52.0
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 1.4e-06 56.6 79 38.0
TAR257G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.4e-06 55.8 107 32.7
Dinv21333 Davidia involucrata HOM05D008341 ORTHO05D009679 3.1e-06 55.5 97 32.0
Dinv07965 Davidia involucrata HOM05D008341 ORTHO05D009679 5.3e-06 54.7 102 30.4
Sopen06g017080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-06 54.7 107 29.0


User provided reference genes

Program Settings