Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 0.0e+00 1085.5 537 100.0
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 2.6e-252 875.2 475 90.1
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 6.8e-240 833.9 474 86.7
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 3.9e-219 765.0 469 78.9
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 2.9e-214 748.8 475 75.6
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 2.3e-200 702.6 415 79.8
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 2.0e-199 699.5 416 79.8
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 1.1e-197 693.7 384 88.3
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 8.4e-190 667.5 475 69.1
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 9.3e-189 664.1 449 71.3
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 4.6e-188 661.8 481 66.9
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.0e-187 660.6 469 68.7
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 6.6e-179 631.3 458 65.3
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 8.7e-179 630.9 447 65.5
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 4.3e-178 628.6 465 67.5
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 7.3e-178 627.9 451 67.4
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 4.5e-175 618.6 473 61.3
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 6.0e-172 608.2 447 64.2
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.8e-171 606.7 447 63.8
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.0e-171 605.9 474 60.3
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.5e-170 602.8 447 62.6
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 3.3e-170 602.4 451 62.5
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 7.4e-170 601.3 454 62.3
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.6e-169 600.1 454 62.8
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 2.9e-166 589.3 449 63.9
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 5.5e-165 585.1 447 61.7
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 9.3e-165 584.3 405 69.4
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 6.0e-164 581.6 522 55.0
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 5.1e-163 578.6 426 66.2
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 4.3e-162 575.5 503 56.1
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 2.9e-158 562.8 456 57.9
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 2.5e-157 559.7 453 61.4
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 2.7e-156 556.2 453 60.3
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 3.5e-156 555.8 506 54.9
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 7.9e-156 554.7 455 57.8
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 1.0e-155 554.3 457 56.0
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.3e-155 553.9 480 57.5
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 3.9e-155 552.4 433 63.3
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 2.5e-154 549.7 452 56.2
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 5.7e-154 548.5 386 67.9
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 7.4e-154 548.1 480 56.9
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 1.0e-150 537.7 447 57.0
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 2.9e-150 536.2 446 56.3
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 1.9e-149 533.5 491 53.8
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 7.9e-148 528.1 379 63.6
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.1e-146 524.2 368 65.2
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 8.2e-145 518.1 480 54.6
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.1e-144 517.7 513 52.4
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 5.3e-144 515.4 486 52.3
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 5.3e-144 515.4 500 52.0
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 2.6e-143 513.1 485 53.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 9.4e-141 504.6 379 62.5
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 2.1e-140 503.4 458 57.9
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 4.7e-140 502.3 332 72.9
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 6.7e-139 498.4 447 52.6
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 2.6e-138 496.5 447 54.4
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 9.7e-138 494.6 448 55.1
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 4.5e-135 485.7 452 53.8
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 7.7e-135 485.0 425 56.2
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.2e-132 477.6 450 52.4
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 2.7e-132 476.5 399 57.6
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 3.6e-132 476.1 477 51.4
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 3.6e-132 476.1 477 51.4
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 6.1e-132 475.3 450 51.8
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 4.0e-131 472.6 471 52.2
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 8.8e-131 471.5 450 51.8
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 2.6e-130 469.9 450 51.1
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 4.4e-130 469.2 450 52.9
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 1.7e-129 467.2 480 50.6
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 1.7e-129 467.2 450 50.7
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 3.7e-129 466.1 475 49.9
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 9.1e-128 461.5 397 53.9
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 4.5e-127 459.1 480 49.4
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.2e-124 451.1 395 55.2
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 4.7e-124 449.1 483 47.2
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.8e-123 447.2 387 58.7
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 7.5e-122 441.8 450 48.9
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 7.5e-122 441.8 319 66.1
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 2.8e-121 439.9 395 54.4
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 8.3e-121 438.3 481 47.2
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 5.9e-119 432.2 490 45.7
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 1.0e-115 421.4 355 56.6
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 8.8e-115 418.3 471 46.5
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 1.2e-114 417.9 328 60.1
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 7.7e-111 405.2 320 61.2
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 2.9e-110 403.3 468 47.0
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 1.9e-109 400.6 342 55.3
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.8e-108 396.7 311 58.8
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 1.0e-107 394.8 396 47.5
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 4.0e-107 392.9 413 50.8
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 6.8e-107 392.1 336 55.7
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 8.3e-97 358.6 245 67.8
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 8.6e-94 348.6 450 41.1
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 8.6e-86 322.0 411 44.0
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 2.2e-81 307.4 269 59.9
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 3.5e-79 300.1 234 57.7
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.5e-77 294.7 250 58.4
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 6.2e-76 289.3 285 48.4
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 6.2e-68 262.7 396 39.9
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 3.5e-63 246.9 395 38.2
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 6.1e-39 166.4 172 52.9
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 3.7e-28 130.6 257 29.2
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 4.7e-23 113.6 263 27.8
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 6.1e-23 113.2 68 80.9
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.7e-21 106.7 75 68.0
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.1e-19 100.9 80 61.2
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 5.0e-17 93.6 69 69.6
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 2.5e-16 91.3 53 69.8
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.8e-14 82.8 59 59.3
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.7e-09 68.6 68 55.9
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.9e-09 67.8 45 71.1
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 3.8e-09 67.4 42 69.0
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.5e-08 64.7 40 75.0
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 3.2e-08 64.3 47 63.8
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 1.6e-07 62.0 49 61.2


User provided reference genes

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