Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G961 Trifolium pratense HOM05D000292 ORTHO05D000172 2.3e-51 205.3 103 100.0
Medtr7g063670 Medicago truncatula HOM05D000292 ORTHO05D000172 6.2e-33 144.1 99 73.7
Psat3g135560 Pisum sativum HOM05D000292 ORTHO05D000172 9.9e-31 136.7 100 68.0
Psat3g135600 Pisum sativum HOM05D000292 ORTHO05D000172 6.4e-30 134.0 99 68.7
Medtr3g007740 Medicago truncatula HOM05D000292 ORTHO05D000172 8.1e-25 117.1 82 69.5
TPR.G31737 Trifolium pratense HOM05D000292 ORTHO05D000172 2.9e-22 108.6 81 65.4
Medtr7g063690 Medicago truncatula HOM05D000292 ORTHO05D000172 7.1e-21 104.0 81 59.3
Medtr7g063840 Medicago truncatula HOM05D000292 ORTHO05D000172 3.5e-20 101.7 81 63.0
Psat4g099720 Pisum sativum HOM05D000292 ORTHO05D000172 3.0e-19 98.6 99 51.5
Psat5g041040 Pisum sativum HOM05D000292 ORTHO05D000172 3.0e-19 98.6 99 51.5
TPR.G16333 Trifolium pratense HOM05D000292 ORTHO05D000172 6.6e-19 97.4 94 53.2
Medtr7g063820 Medicago truncatula HOM05D000292 ORTHO05D000172 3.3e-18 95.1 83 61.4
Medtr7g063830 Medicago truncatula HOM05D000292 ORTHO05D000172 9.6e-18 93.6 88 60.2
Medtr7g063880 Medicago truncatula HOM05D000292 ORTHO05D000172 2.1e-17 92.4 103 51.5
Medtr7g063660 Medicago truncatula HOM05D000292 ORTHO05D000172 1.1e-16 90.1 99 51.5
Medtr7g063890 Medicago truncatula HOM05D000292 ORTHO05D000172 1.4e-16 89.7 98 51.0
TPR.G9003 Trifolium pratense HOM05D000292 ORTHO05D000172 1.4e-16 89.7 88 59.1
Ca_05441_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 6.9e-16 87.4 92 53.3
Medtr7g063920 Medicago truncatula HOM05D000292 ORTHO05D000172 6.9e-16 87.4 114 43.9
Medtr7g063900 Medicago truncatula HOM05D000292 ORTHO05D000172 9.0e-16 87.0 96 49.0
TPR.G16347 Trifolium pratense HOM05D000292 ORTHO05D000172 9.0e-16 87.0 82 54.9
TPR.G16318 Trifolium pratense HOM05D000292 ORTHO05D000172 2.6e-15 85.5 82 58.5
Medtr7g062280 Medicago truncatula HOM05D000292 ORTHO05D000172 4.4e-15 84.7 81 51.9
TPR.G35785 Trifolium pratense HOM05D000292 ORTHO05D000172 5.8e-15 84.3 84 48.8
TPR.G29509 Trifolium pratense HOM05D000292 ORTHO05D000172 7.6e-15 84.0 84 48.8
Ca_07039_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 9.9e-15 83.6 87 50.6
Medtr7g062300 Medicago truncatula HOM05D000292 ORTHO05D000172 1.3e-14 83.2 102 46.1
Glyma.07G137801 Glycine max HOM05D000292 ORTHO05D000172 1.7e-14 82.8 82 51.2
LjContig00312_ERROPOS870357g0020002 Lotus japonicus HOM05D000292 ORTHO05D000172 1.7e-14 82.8 79 54.4
TPR.G9015 Trifolium pratense HOM05D000292 ORTHO05D000172 1.1e-13 80.1 84 47.6
VMungo1383G2273 Vigna mungo HOM05D000292 ORTHO05D000172 2.4e-13 79.0 81 48.1
Phvul.008G114800 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 3.2e-13 78.6 81 46.9
Glyma.07G137500 Glycine max HOM05D000292 ORTHO05D000172 7.1e-13 77.4 81 46.9
Psat3g133240 Pisum sativum HOM05D000292 ORTHO05D000172 1.2e-12 76.6 81 48.1
VMungo0331G0650 Vigna mungo HOM05D000292 ORTHO05D000172 2.1e-12 75.9 80 50.0
VMungo1383G1253 Vigna mungo HOM05D000292 ORTHO05D000172 4.6e-12 74.7 80 48.8
Glyma.18G293900 Glycine max HOM05D000292 ORTHO05D000172 5.1e-11 71.2 80 47.5
Lalb_Chr03g0042921 Lupinus albus HOM05D000292 ORTHO05D000172 6.6e-11 70.9 82 42.7
Phvul.008G110100 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.5e-10 69.7 97 44.3
Psat3g131720 Pisum sativum HOM05D000292 ORTHO05D000172 1.5e-10 69.7 61 57.4
Phvul.008G110000 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.9e-10 69.3 76 47.4
TPR.G16319 Trifolium pratense HOM05D000292 ORTHO05D000172 2.5e-10 68.9 85 42.4
TPR.G34868 Trifolium pratense HOM05D000292 ORTHO05D000172 3.3e-10 68.6 79 48.1
VMungo0647G0748 Vigna mungo HOM05D000292 ORTHO05D000172 9.6e-10 67.0 79 44.3
arahy.Tifrunner.gnm1.ann1.7GI6UN Arachis hypogaea HOM05D000292 ORTHO05D000172 1.6e-09 66.2 75 49.3
Phvul.008G110200 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.6e-09 66.2 76 46.1
Medtr7g066430 Medicago truncatula HOM05D000292 ORTHO05D000172 2.1e-09 65.9 95 38.9
Ca_09163_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 3.6e-09 65.1 75 46.7
Psat3g135400 Pisum sativum HOM05D000292 ORTHO05D000172 3.6e-09 65.1 90 38.9
TPR.G16339 Trifolium pratense HOM05D000292 ORTHO05D000172 4.8e-09 64.7 90 41.1
Glyma.18G194200 Glycine max HOM05D000292 ORTHO05D000172 6.2e-09 64.3 79 40.5
Phvul.008G110700 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 8.1e-09 63.9 79 43.0
arahy.Tifrunner.gnm1.ann1.ZC3BE2 Arachis hypogaea HOM05D000292 ORTHO05D000172 1.1e-08 63.5 75 48.0
Medtr7g066480 Medicago truncatula HOM05D000292 ORTHO05D000172 1.1e-08 63.5 82 41.5
Phvul.008G110600 Phaseolus vulgaris HOM05D000292 ORTHO05D000172 1.1e-08 63.5 76 44.7
TPR.G35161 Trifolium pratense HOM05D000292 ORTHO05D000172 1.1e-08 63.5 69 44.9
Glyma.18G195000 Glycine max HOM05D000292 ORTHO05D000172 1.4e-08 63.2 78 44.9
Lj1g0012967 Lotus japonicus HOM05D000292 ORTHO05D000172 1.8e-08 62.8 79 41.8
TPR.G34864 Trifolium pratense HOM05D000292 ORTHO05D000172 1.8e-08 62.8 81 40.7
Glyma.07G143401 Glycine max HOM05D000292 ORTHO05D000172 3.1e-08 62.0 88 40.9
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 4.0e-08 61.6 72 41.7
Medtr7g066360 Medicago truncatula HOM05D000292 ORTHO05D000172 9.0e-08 60.5 75 42.7
Medtr3g065200 Medicago truncatula HOM05D000292 ORTHO05D000172 2.6e-07 58.9 75 44.0
Medtr7g066340 Medicago truncatula HOM05D000292 ORTHO05D000172 2.6e-07 58.9 82 39.0
Medtr7g066260 Medicago truncatula HOM05D000292 ORTHO05D000172 3.4e-07 58.5 89 34.8
Glyma.18G194600 Glycine max HOM05D000292 ORTHO05D000172 4.5e-07 58.2 75 42.7
Glyma.18G194800 Glycine max HOM05D000292 ORTHO05D000172 4.5e-07 58.2 75 42.7
Lalb_Chr03g0042911 Lupinus albus HOM05D000292 ORTHO05D000172 4.5e-07 58.2 75 40.0
Psat3g147880 Pisum sativum HOM05D000292 ORTHO05D000172 4.5e-07 58.2 75 42.7
Medtr7g066350 Medicago truncatula HOM05D000292 ORTHO05D000172 5.8e-07 57.8 69 42.0
Nitab4.5_0000008g0470 Nicotiana tabacum HOM05D000292 ORTHO05D000172 5.8e-07 57.8 74 43.2
Medtr7g058710 Medicago truncatula HOM05D000292 ORTHO05D000172 7.6e-07 57.4 75 40.0
Peaxi162Scf00141g00031 Petunia axillaris HOM05D000292 ORTHO05D000172 7.6e-07 57.4 81 39.5
VMungo0720G0457 Vigna mungo HOM05D000292 ORTHO05D000172 7.6e-07 57.4 77 44.2
Peaxi162Scf00141g00027 Petunia axillaris HOM05D000292 ORTHO05D000172 9.9e-07 57.0 71 46.5
Psat3g135120 Pisum sativum HOM05D000292 ORTHO05D000172 9.9e-07 57.0 70 42.9
Lj1g0016229 Lotus japonicus HOM05D000292 ORTHO05D000172 1.3e-06 56.6 72 48.6
Medtr7g063870 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-06 56.2 57 49.1
Medtr7g066490 Medicago truncatula HOM05D000292 ORTHO05D000172 1.7e-06 56.2 79 39.2
Medtr7g066570 Medicago truncatula HOM05D000292 ORTHO05D000172 2.2e-06 55.8 72 43.1
Peaxi162Scf01352g00021 Petunia axillaris HOM05D000292 ORTHO05D000172 2.2e-06 55.8 81 39.5
Sopen09g006720 Solanum pennellii HOM05D000292 ORTHO05D000172 2.2e-06 55.8 81 40.7
TPR.G1577 Trifolium pratense HOM05D000292 ORTHO05D000172 2.2e-06 55.8 78 35.9
TPR.G9007 Trifolium pratense HOM05D000292 ORTHO05D000172 2.2e-06 55.8 59 44.1
Peaxi162Scf00141g00029 Petunia axillaris HOM05D000292 ORTHO05D000172 2.9e-06 55.5 81 40.7
Solyc09g011910.3 Solanum lycopersicum HOM05D000292 ORTHO05D000172 2.9e-06 55.5 65 44.6
arahy.Tifrunner.gnm1.ann1.ZH6UKT Arachis hypogaea HOM05D000292 ORTHO05D000172 3.8e-06 55.1 71 43.7
Lalb_Chr03g0042891 Lupinus albus HOM05D000292 ORTHO05D000172 3.8e-06 55.1 73 41.1
Medtr1g014060 Medicago truncatula HOM05D000292 ORTHO05D000172 3.8e-06 55.1 67 43.3
PGSC0003DMG400020360 Solanum tuberosum HOM05D000292 ORTHO05D000172 3.8e-06 55.1 81 38.3
Aqoxy7G03857 Aquilegia oxysepala HOM05D001897 ORTHO05D001953 4.9e-06 54.7 71 43.7
Glyma.18G194700 Glycine max HOM05D000292 ORTHO05D000172 4.9e-06 54.7 75 40.0
Medtr7g066290 Medicago truncatula HOM05D000292 ORTHO05D000172 4.9e-06 54.7 69 36.2
PGSC0003DMG400020358 Solanum tuberosum HOM05D000292 ORTHO05D000172 4.9e-06 54.7 71 43.7
Peaxi162Scf00141g00030 Petunia axillaris HOM05D000292 ORTHO05D000172 6.4e-06 54.3 72 43.1
TPR.G23925 Trifolium pratense HOM05D000292 ORTHO05D000172 6.4e-06 54.3 29 89.7
Medtr7g066410 Medicago truncatula HOM05D000292 ORTHO05D000172 8.4e-06 53.9 88 38.6
Peaxi162Scf01404g00007 Petunia axillaris HOM05D000292 ORTHO05D000172 8.4e-06 53.9 74 43.2


User provided reference genes

Program Settings