Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9571 Trifolium pratense HOM05D008821 ORTHO05D010464 1.2e-76 289.7 141 100.0
Medtr5g077560 Medicago truncatula HOM05D008821 ORTHO05D010464 1.8e-51 206.1 141 74.5
Psat7g081560 Pisum sativum HOM05D008821 ORTHO05D010464 2.6e-50 202.2 138 76.8
Lj5g0007792 Lotus japonicus HOM05D008821 ORTHO05D010464 1.1e-40 170.2 137 66.4
Lj4g0018254 Lotus japonicus HOM05D008821 ORTHO05D010464 7.1e-40 167.5 137 66.4
Glyma.05G142600 Glycine max HOM05D008821 ORTHO05D010464 9.6e-37 157.1 132 66.7
Glyma.08G098600 Glycine max HOM05D008821 ORTHO05D010464 3.1e-35 152.1 146 60.3
Phvul.002G180600 Phaseolus vulgaris HOM05D008821 ORTHO05D010464 2.1e-31 139.4 139 58.3
Lalb_Chr12g0196061 Lupinus albus HOM05D008821 ORTHO05D010464 4.1e-27 125.2 129 55.0
arahy.Tifrunner.gnm1.ann1.SDZ0GZ Arachis hypogaea HOM05D008821 ORTHO05D010464 6.5e-25 117.9 131 54.2
arahy.Tifrunner.gnm1.ann1.ZX7BQ2 Arachis hypogaea HOM05D000116 ORTHO05D010464 3.2e-24 115.5 121 55.4
Nn4g26609 Nelumbo nucifera HOM05D008821 ORTHO05D010464 5.5e-24 114.8 140 44.3
TAR460G0006 Trochodendron aralioides HOM05D008821 ORTHO05D010464 3.7e-20 102.1 131 42.0
CiPaw.09G121300 Carya illinoinensis HOM05D008821 ORTHO05D010464 1.4e-19 100.1 118 49.2
FAN21G0539 Fragaria x ananassa HOM05D008821 ORTHO05D010464 2.9e-17 92.4 139 46.0
ClCG01G024780 Citrullus lanatus HOM05D008821 ORTHO05D010464 3.8e-17 92.0 97 52.6
FvH4_3g05210 Fragaria vesca HOM05D008821 ORTHO05D010464 3.8e-17 92.0 139 46.0
PSO541G6549 Papaver somniferum HOM05D008821 ORTHO05D010464 5.0e-17 91.7 106 47.2
RcHm_v2.0_Chr5g0014511 Rosa chinensis HOM05D008821 ORTHO05D010464 1.4e-16 90.1 145 42.1
Atru.chr10.1160 Acer truncatum HOM05D008821 ORTHO05D010464 1.9e-16 89.7 133 42.1
FAN16G2928 Fragaria x ananassa HOM05D008821 ORTHO05D010464 2.5e-16 89.4 141 45.4
FAN16G1747 Fragaria x ananassa HOM05D008821 ORTHO05D010464 4.2e-16 88.6 139 45.3
Dinv32224 Davidia involucrata HOM05D000116 ORTHO05D000133 9.4e-16 87.4 101 48.5
MELO3C007119.2 Cucumis melo HOM05D008821 ORTHO05D010464 1.2e-15 87.0 97 50.5
CsaV3_6G051900 Cucumis sativus L. HOM05D000116 ORTHO05D010464 1.6e-15 86.7 91 52.7
Thecc.06G147000 Theobroma cacao HOM05D008821 ORTHO05D010464 7.9e-15 84.3 130 40.8
MBI18_g11239_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 5.2e-14 81.6 126 39.7
Manes.15G123932 Manihot esculenta HOM05D008821 ORTHO05D010464 5.2e-14 81.6 107 45.8
Prupe.4G083800 Prunus persica HOM05D008821 ORTHO05D010464 8.8e-14 80.9 138 40.6
Aqoxy1G01677 Aquilegia oxysepala HOM05D008821 ORTHO05D010464 6.3e-12 74.7 137 41.6
CSS0030437 Camellia sinensis var. sinensis HOM05D008821 ORTHO05D010464 8.2e-12 74.3 122 38.5
Sed0011418 Sechium edule HOM05D008821 ORTHO05D010464 8.2e-12 74.3 101 42.6
Oeu007934.1 Olea europaea HOM05D008821 ORTHO05D010464 2.4e-11 72.8 100 47.0
Oeu007936.1 Olea europaea HOM05D008821 ORTHO05D010464 2.4e-11 72.8 100 47.0
Gohir.A06G139000 Gossypium hirsutum HOM05D008821 ORTHO05D010464 2.0e-10 69.7 138 34.8
Haze_05636 Corylus avellana HOM05D008821 ORTHO05D010464 5.9e-10 68.2 65 53.8
Cfa000919 Carpinus fangiana HOM05D008821 ORTHO05D010464 7.7e-10 67.8 65 53.8
Gohir.D06G143700 Gossypium hirsutum HOM05D008821 ORTHO05D010464 1.0e-09 67.4 137 34.3
Sc24g0001660 Simmondsia chinensis HOM05D008821 ORTHO05D010464 1.3e-09 67.0 119 36.1
Gorai.010G167500 Gossypium raimondii HOM05D008821 ORTHO05D010464 1.7e-09 66.6 137 34.3
MBI02_g21430_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 8.5e-09 64.3 75 48.0
ATR1098G131 Amborella trichopoda HOM05D008821 ORTHO05D010464 2.7e-07 59.3 104 40.4


User provided reference genes

Program Settings