Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G955 Trifolium pratense HOM05D000252 ORTHO05D008225 1.8e-66 255.8 126 100.0
TPR.G30966 Trifolium pratense HOM05D000252 ORTHO05D008225 8.8e-66 253.4 126 99.2
Psat0s3597g0040 Pisum sativum HOM05D000252 ORTHO05D008225 1.5e-60 236.1 126 88.1
Medtr6g041980 Medicago truncatula HOM05D000252 ORTHO05D008225 4.2e-60 234.6 126 89.7
Lj2g0016577 Lotus japonicus HOM05D000252 ORTHO05D008225 2.8e-59 231.9 126 87.3
Glyma.02G078600 Glycine max HOM05D000252 ORTHO05D008225 1.0e-58 229.9 126 87.3
Phvul.004G089200 Phaseolus vulgaris HOM05D000252 ORTHO05D008225 8.9e-58 226.9 126 84.1
VMungo0464G0845 Vigna mungo HOM05D000252 ORTHO05D008225 1.2e-57 226.5 125 86.4
Ca_04665_v3 Cicer arietinum L. HOM05D000252 ORTHO05D008225 1.5e-57 226.1 126 86.5
arahy.Tifrunner.gnm1.ann1.NU16HH Arachis hypogaea HOM05D000252 ORTHO05D008225 2.0e-57 225.7 126 86.5
Lalb_Chr03g0035631 Lupinus albus HOM05D000252 ORTHO05D008225 2.0e-57 225.7 126 85.7
MD10G1036200 Malus domestica HOM05D000252 ORTHO05D008225 2.6e-57 225.3 126 85.7
Prupe.8G041900 Prunus persica HOM05D000252 ORTHO05D008225 3.4e-57 224.9 126 84.9
arahy.Tifrunner.gnm1.ann1.LWF4SI Arachis hypogaea HOM05D000252 ORTHO05D008225 9.8e-57 223.4 126 85.7
Dinv41028 Davidia involucrata HOM05D000252 ORTHO05D008225 4.9e-56 221.1 126 83.3
SalBow7G3195 Salvia bowleyana HOM05D000252 ORTHO05D008225 6.4e-56 220.7 126 82.5
Haze_17808 Corylus avellana HOM05D000252 ORTHO05D008225 1.4e-55 219.5 125 84.0
CiPaw.15G012100 Carya illinoinensis HOM05D000252 ORTHO05D008225 2.4e-55 218.8 126 81.7
MBI04_g33334_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D008225 2.4e-55 218.8 126 82.5
Gohir.D06G115900 Gossypium hirsutum HOM05D000252 ORTHO05D008225 4.1e-55 218.0 126 84.1
Rhsim06G0128200 Rhododendron simsii HOM05D000252 ORTHO05D008225 7.0e-55 217.2 126 80.2
Gohir.A06G111600 Gossypium hirsutum HOM05D000252 ORTHO05D008225 9.2e-55 216.9 126 81.7
RcHm_v2.0_Chr6g0274101 Rosa chinensis HOM05D000252 ORTHO05D008225 9.2e-55 216.9 126 81.7
TAR381G0219 Trochodendron aralioides HOM05D000252 ORTHO05D008225 1.2e-54 216.5 126 82.5
AUR62034887 Chenopodium quinoa HOM05D000252 ORTHO05D008225 1.6e-54 216.1 126 81.7
COL.COLO4_13738 Corchorus olitorius HOM05D002713 ORTHO05D008225 1.6e-54 216.1 126 82.5
Aqoxy5G02021 Aquilegia oxysepala HOM05D000252 ORTHO05D008225 2.7e-54 215.3 126 82.5
FAN15G0190 Fragaria x ananassa HOM05D000252 ORTHO05D008225 2.7e-54 215.3 126 81.0
Sc02g0003800 Simmondsia chinensis HOM05D000252 ORTHO05D008225 2.7e-54 215.3 126 79.4
Ah.05g168210 Amaranthus hybridus HOM05D000252 ORTHO05D008225 5.9e-54 214.2 126 80.2
FvH4_2g12970 Fragaria vesca HOM05D000252 ORTHO05D008225 5.9e-54 214.2 126 80.2
FAN24G1341 Fragaria x ananassa HOM05D000252 ORTHO05D008225 5.9e-54 214.2 126 80.2
FAN27G1385 Fragaria x ananassa HOM05D000252 ORTHO05D008225 7.8e-54 213.8 126 79.4
Atru.chr13.1997 Acer truncatum HOM05D000252 ORTHO05D008225 1.0e-53 213.4 126 81.0
Manes.18G095400 Manihot esculenta HOM05D000252 ORTHO05D008225 1.0e-53 213.4 126 79.4
THA.LOC104806768 Tarenaya hassleriana HOM05D000252 ORTHO05D008225 1.3e-53 213.0 126 78.6
Lj7A385T61 Lonicera japonica HOM05D000252 ORTHO05D008225 1.7e-53 212.6 126 79.4
Cc10_g15360 Coffea canephora HOM05D000252 ORTHO05D008225 2.3e-53 212.2 126 81.0
vmacro21129 Vaccinium macrocarpon HOM05D000252 ORTHO05D008225 2.3e-53 212.2 126 80.2
Thecc.08G160400 Theobroma cacao HOM05D000252 ORTHO05D008225 5.0e-53 211.1 127 81.1
AUR62026630 Chenopodium quinoa HOM05D000252 ORTHO05D008225 8.6e-53 210.3 126 79.4
COL.COLO4_22296 Corchorus olitorius HOM05D000252 ORTHO05D008225 8.6e-53 210.3 126 80.2
GSVIVG01001427001 Vitis vinifera HOM05D000252 ORTHO05D008225 8.6e-53 210.3 126 80.2
PGR102G2743 Punica granatum HOM05D000252 ORTHO05D008225 1.1e-52 209.9 126 75.4
Cpa.g.sc26.104 Carica papaya HOM05D000252 ORTHO05D008225 1.5e-52 209.5 126 77.8
Manes.18G095300 Manihot esculenta HOM05D000252 ORTHO05D008225 1.5e-52 209.5 126 77.8
Potri.005G197700 Populus trichocarpa HOM05D000252 ORTHO05D008225 1.5e-52 209.5 126 78.6
MSTRG.973 Avicennia marina HOM05D000252 ORTHO05D008225 1.9e-52 209.1 126 77.8
EL10Ac1g01610 Beta vulgaris HOM05D000252 ORTHO05D008225 1.9e-52 209.1 126 78.6
MELO3C024061.2 Cucumis melo HOM05D000252 ORTHO05D008225 1.9e-52 209.1 126 79.4
Hund17493 Selenicereus undatus HOM05D000252 ORTHO05D008225 1.9e-52 209.1 126 78.6
Sabra05G0150400 Salix brachista HOM05D000252 ORTHO05D008225 3.3e-52 208.4 126 78.6
Sed0027840 Sechium edule HOM05D000252 ORTHO05D008225 3.3e-52 208.4 126 77.0
AT4G09750 Arabidopsis thaliana HOM05D000252 ORTHO05D008225 4.3e-52 208.0 126 77.0
Carub.0006s2822 Capsella rubella HOM05D000252 ORTHO05D008225 4.3e-52 208.0 126 77.0
Nn1g05994 Nelumbo nucifera HOM05D000252 ORTHO05D008225 4.3e-52 208.0 126 77.0
TWI34G0678 Tripterygium wilfordii HOM05D000252 ORTHO05D008225 4.3e-52 208.0 126 77.0
CARHR260740 Cardamine hirsuta HOM05D000252 ORTHO05D008225 5.6e-52 207.6 126 76.2
Oeu046073.1 Olea europaea HOM05D000252 ORTHO05D008225 7.3e-52 207.2 125 75.2
ATR0322G044 Amborella trichopoda HOM05D000252 ORTHO05D008225 9.5e-52 206.8 126 75.4
CsaV3_7G024450 Cucumis sativus L. HOM05D002084 ORTHO05D008225 9.5e-52 206.8 126 77.0
AL6G43390 Arabidopsis lyrata HOM05D000252 ORTHO05D008225 1.2e-51 206.5 126 76.2
A09p29350 Brassica napus HOM05D000252 ORTHO05D008225 1.2e-51 206.5 126 77.0
BraA09t38502Z Brassica rapa HOM05D000252 ORTHO05D008225 1.2e-51 206.5 126 77.0
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.2e-51 206.5 126 77.0
Lsat_1_v5_gn_1_5160 Lactuca sativa HOM05D000252 ORTHO05D008225 1.2e-51 206.5 126 78.6
Sp6g07750 Schrenkiella parvula HOM05D000252 ORTHO05D008225 1.2e-51 206.5 126 77.0
Eucgr.F04171 Eucalyptus grandis HOM05D000252 ORTHO05D008225 1.6e-51 206.1 126 76.2
Thhalv10028805m.g Eutrema salsugineum HOM05D000252 ORTHO05D008225 1.6e-51 206.1 126 77.0
CAN.G1183.11 Capsicum annuum HOM05D000252 ORTHO05D008225 2.1e-51 205.7 126 77.0
PSO210G0631 Papaver somniferum HOM05D000252 ORTHO05D008225 2.1e-51 205.7 126 77.0
BcaB01g01425 Brassica carinata HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 76.2
Ciclev10001743m.g Citrus clementina HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 77.0
DCAR_014320 Daucus carota HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 75.4
PSO170G6236 Papaver somniferum HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 77.0
Sopen04g028040 Solanum pennellii HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 76.2
PGSC0003DMG402025057 Solanum tuberosum HOM05D000252 ORTHO05D008225 2.8e-51 205.3 126 77.0
BcaC04g20974 Brassica carinata HOM05D000252 ORTHO05D008225 6.2e-51 204.1 126 75.4
C09p37410 Brassica napus HOM05D000252 ORTHO05D008225 6.2e-51 204.1 126 75.4
BolC9t56571H Brassica oleracea HOM05D000252 ORTHO05D008225 6.2e-51 204.1 126 75.4
Nitab4.5_0000099g0270 Nicotiana tabacum HOM05D000252 ORTHO05D008225 8.0e-51 203.8 126 76.2
Solyc04g072034.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 8.0e-51 203.8 126 76.2
CDE06G1125 Ceratophyllum demersum HOM05D000252 ORTHO05D008225 1.4e-50 203.0 126 76.2
Solyc04g072033.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 1.4e-50 203.0 126 75.4
HanXRQChr05g0137651 Helianthus annuus HOM05D000252 ORTHO05D008225 2.3e-50 202.2 126 75.4
Sopen04g028050 Solanum pennellii HOM05D000252 ORTHO05D008225 5.2e-50 201.1 126 74.6
Gorai.010G133600 Gossypium raimondii HOM05D000252 ORTHO05D008225 8.9e-50 200.3 169 63.3
Os06g0590301 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D008225 8.9e-50 200.3 126 74.6
Migut.C00148 Erythranthe guttata HOM05D000252 ORTHO05D008225 5.8e-49 197.6 126 73.8
SEGI_33347 Sequoiadendron giganteum HOM05D000252 ORTHO05D008225 9.8e-49 196.8 125 75.2
BolC2t09362H Brassica oleracea HOM05D000252 ORTHO05D008225 1.4e-47 193.0 123 74.8
unitig_0.g2072 Utricularia gibba HOM05D000252 ORTHO05D008225 4.1e-47 191.4 113 77.9
PSO384G2237 Papaver somniferum HOM05D000252 ORTHO05D008225 1.6e-46 189.5 126 73.0
Eucgr.F04169 Eucalyptus grandis HOM05D000252 ORTHO05D008225 6.0e-46 187.6 126 73.0
PSO135G0690 Papaver somniferum HOM05D000252 ORTHO05D008225 7.8e-46 187.2 126 72.2
FAN20G2468 Fragaria x ananassa HOM05D000252 ORTHO05D008225 1.0e-45 186.8 108 81.5
Zm00001eb386150 Zea mays HOM05D000252 ORTHO05D008225 3.0e-45 185.3 126 69.8
Peaxi162Scf00360g00617 Petunia axillaris HOM05D000252 ORTHO05D008225 3.3e-44 181.8 109 78.9
Duzib116G0862 Durio zibethinus HOM05D000252 ORTHO05D008225 6.8e-42 174.1 126 70.6
SMO147G0257 Selaginella moellendorffii HOM05D000252 ORTHO05D008225 1.5e-41 172.9 124 62.1
QL02p037260 Quercus lobata HOM05D000252 ORTHO05D008225 3.4e-41 171.8 230 43.9
QL02p037306 Quercus lobata HOM05D000252 ORTHO05D008225 3.4e-41 171.8 230 43.9
Nitab4.5_0003770g0020 Nicotiana tabacum HOM05D000252 ORTHO05D008225 2.4e-39 165.6 126 65.1
HPP92_021783 Vanilla planifolia HOM05D000252 ORTHO05D008225 2.1e-38 162.5 124 64.5
Pp3c12_19420 Physcomitrium patens HOM05D000252 ORTHO05D008225 1.2e-35 153.3 125 59.2
AagrBONN_evm.TU.Sc2ySwM_368.716 Anthoceros agrestis HOM05D000252 ORTHO05D008225 2.1e-35 152.5 127 59.1
AagrBONN_evm.TU.Sc2ySwM_117.1965 Anthoceros agrestis HOM05D002028 ORTHO05D002474 4.7e-35 151.4 127 59.1
ClCG09G010250 Citrullus lanatus HOM05D000252 ORTHO05D008225 4.1e-31 138.3 86 79.1
EL10Ac9g22793 Beta vulgaris HOM05D000252 ORTHO05D008225 1.6e-30 136.3 109 64.2
SGA_v2.0_scaffold133G34675 Striga asiatica HOM05D000252 ORTHO05D008225 1.7e-29 132.9 86 75.6
Mapoly0020s0012 Marchantia polymorpha HOM05D000252 ORTHO05D008225 5.6e-28 127.9 123 52.0
Gohir.D06G115950 Gossypium hirsutum HOM05D000252 ORTHO05D008225 2.4e-26 122.5 75 82.7
PRCOL_00002698 Prasinoderma coloniale HOM05D000252 ORTHO05D008225 2.2e-24 115.9 144 43.8
MCO04G310 Micromonas commoda HOM05D000252 ORTHO05D008225 1.4e-23 113.2 129 49.6
HanXRQChr11g0329831 Helianthus annuus HOM05D055804 ORTHO05D008225 1.2e-22 110.2 114 50.9
Cre08.g381516 Chlamydomonas reinhardtii HOM05D000252 ORTHO05D008225 9.9e-17 90.5 137 39.4
Eucgr.F04174 Eucalyptus grandis HOM05D000252 ORTHO05D008225 5.6e-12 74.7 67 56.7
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.4e-12 74.3 40 80.0
Duzib093G0681 Durio zibethinus HOM05D000252 ORTHO05D008225 1.6e-11 73.2 46 76.1
HanXRQChr11g0330171 Helianthus annuus HOM05D000252 ORTHO05D222516 3.1e-10 68.9 80 47.5
EL10As6g23692 Beta vulgaris HOM05D000832 ORTHO05D010695 1.5e-09 66.6 43 72.1
Cre09.g398252 Chlamydomonas reinhardtii HOM05D000252 ORTHO05D000307 1.4e-07 60.1 115 31.3
HanXRQChr14g0432871 Helianthus annuus HOM05D044620 ORTHO05D226111 1.9e-07 59.7 40 65.0
HanXRQChr15g0492851 Helianthus annuus HOM05D044620 ORTHO05D227349 1.9e-07 59.7 40 65.0
CBR_g20345 Chara braunii HOM05D000252 ORTHO05D000307 7.1e-07 57.8 125 32.0
Rhsim06G0092100 Rhododendron simsii HOM05D000252 ORTHO05D008225 9.3e-07 57.4 39 66.7


User provided reference genes

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