Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G949 Trifolium pratense HOM05D000254 ORTHO05D000165 1.9e-41 172.2 91 100.0
Glyma.04G172200 Glycine max HOM05D000254 ORTHO05D000165 3.2e-25 118.2 87 75.9
Glyma.01G083800 Glycine max HOM05D000254 ORTHO05D000165 2.7e-24 115.2 87 74.7
Glyma.15G026200 Glycine max HOM05D000254 ORTHO05D000165 7.9e-24 113.6 87 74.7
Glyma.19G084500 Glycine max HOM05D000254 ORTHO05D000165 7.9e-24 113.6 87 73.6
Glyma.01G009100 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.01G155700 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.02G054300 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.03G059500 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.03G160800 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.05G111600 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.06G110300 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.07G188300 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.07G229400 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.08G123900 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.09G205200 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.10G093700 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.10G133400 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.11G170400 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.11G185400 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.17G071500 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.17G162400 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.18G099300 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.18G180700 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.18G248500 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.20G083200 Glycine max HOM05D000254 ORTHO05D000165 1.0e-23 113.2 87 73.6
Glyma.17G230400 Glycine max HOM05D000254 ORTHO05D000165 2.3e-23 112.1 87 72.4
Glyma.02G075400 Glycine max HOM05D000254 ORTHO05D000165 5.1e-23 110.9 87 72.4
Glyma.09G092200 Glycine max HOM05D000254 ORTHO05D000165 5.1e-23 110.9 87 72.4
Glyma.15G258000 Glycine max HOM05D000254 ORTHO05D000165 5.1e-23 110.9 87 72.4
TPR.G18474 Trifolium pratense HOM05D000254 ORTHO05D000165 5.1e-23 110.9 88 72.7
TPR.G6105 Trifolium pratense HOM05D000254 ORTHO05D000165 6.7e-23 110.5 88 71.6
Glyma.10G133300 Glycine max HOM05D000254 ORTHO05D000165 8.7e-23 110.2 87 72.4
TPR.G39588 Trifolium pratense HOM05D000254 ORTHO05D000165 8.7e-23 110.2 88 71.6
TPR.G35935 Trifolium pratense HOM05D000254 ORTHO05D000165 1.1e-22 109.8 88 72.7
Glyma.09G085100 Glycine max HOM05D000254 ORTHO05D000165 1.9e-22 109.0 87 73.6
Lj5g0023700 Lotus japonicus HOM05D000254 ORTHO05D000165 4.8e-21 104.4 86 67.4
LjContig00141g0001801 Lotus japonicus HOM05D000254 ORTHO05D000165 9.0e-20 100.1 85 65.9
Lj4g0019202 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-19 98.6 85 65.9
Lj4g0023060 Lotus japonicus HOM05D000254 ORTHO05D000165 3.4e-19 98.2 86 62.8
Lj6g0025209 Lotus japonicus HOM05D000254 ORTHO05D000165 3.4e-19 98.2 85 62.4
LjContig00141g0020943 Lotus japonicus HOM05D000254 ORTHO05D000165 4.5e-19 97.8 86 62.8
Lj1g0014598 Lotus japonicus HOM05D000254 ORTHO05D000165 5.9e-19 97.4 86 66.3
LjContig00141g0013529 Lotus japonicus HOM05D000254 ORTHO05D000165 7.6e-19 97.1 86 61.6
Glyma.18G214900 Glycine max HOM05D000254 ORTHO05D000165 2.5e-17 92.0 87 63.2
Lj3g0027175 Lotus japonicus HOM05D000254 ORTHO05D000165 9.3e-17 90.1 86 60.5
Glyma.08G271300 Glycine max HOM05D000254 ORTHO05D000165 3.9e-15 84.7 73 61.6
Glyma.17G248000 Glycine max HOM05D000254 ORTHO05D000165 5.1e-15 84.3 92 58.7
Glyma.13G203500 Glycine max HOM05D000254 ORTHO05D000165 2.5e-14 82.0 78 64.1
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 5.7e-14 80.9 70 67.1
TPR.G14103 Trifolium pratense HOM05D000254 ORTHO05D000165 5.7e-14 80.9 58 70.7
TPR.G24080 Trifolium pratense HOM05D000254 ORTHO05D000165 1.4e-12 76.3 66 68.2
Medtr5g007300 Medicago truncatula HOM05D000008 ORTHO05D000005 2.4e-12 75.5 50 76.0
Glyma.U036600 Glycine max HOM05D000254 ORTHO05D000165 7.7e-11 70.5 62 69.4
TPR.G16812 Trifolium pratense HOM05D000254 ORTHO05D000165 8.5e-10 67.0 57 71.9
Medtr4g035460 Medicago truncatula HOM05D000254 ORTHO05D000165 7.2e-09 63.9 41 73.2
Lj2g0011354 Lotus japonicus HOM05D000254 ORTHO05D000165 2.3e-07 58.9 74 56.8
TPR.G17479 Trifolium pratense HOM05D003135 ORTHO05D000165 3.0e-07 58.5 56 62.5
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 5.1e-07 57.8 81 40.7
LjContig00357g0001689 Lotus japonicus HOM05D000254 ORTHO05D000165 1.1e-06 56.6 77 41.6
TPR.G18786 Trifolium pratense HOM05D000254 ORTHO05D000165 1.1e-06 56.6 81 39.5
Medtr5g010980 Medicago truncatula HOM05D000254 ORTHO05D000165 1.5e-06 56.2 36 75.0
Oeu046483.1 Olea europaea HOM05D000254 ORTHO05D000165 1.5e-06 56.2 80 42.5
PSO478G3137 Papaver somniferum HOM05D000254 ORTHO05D000165 2.0e-06 55.8 82 41.5
TPR.G3195 Trifolium pratense HOM05D000254 ORTHO05D000165 2.0e-06 55.8 81 40.7
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.0e-06 55.8 84 39.3
Lj3g0000312 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-06 55.5 82 39.0
Lj3g0023514 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-06 55.5 82 39.0
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.3e-06 55.1 81 38.3
Oeu005841.1 Olea europaea HOM05D000254 ORTHO05D000165 3.3e-06 55.1 80 41.2
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 3.3e-06 55.1 81 40.7
TWI12G0625 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.3e-06 55.1 84 39.3
Oeu054591.1 Olea europaea HOM05D000254 ORTHO05D000165 4.4e-06 54.7 81 38.3
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 4.4e-06 54.7 81 37.0
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.7e-06 54.3 81 37.0
Glyma.18G159600 Glycine max HOM05D000254 ORTHO05D000165 5.7e-06 54.3 77 37.7
Lj3g0019729 Lotus japonicus HOM05D000254 ORTHO05D000165 5.7e-06 54.3 77 39.0
MD12G1128200 Malus domestica HOM05D000254 ORTHO05D000165 5.7e-06 54.3 78 41.0
Oeu017580.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-06 54.3 80 37.5
Oeu048794.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-06 54.3 81 39.5
CARHR216160 Cardamine hirsuta HOM05D000254 ORTHO05D000165 7.4e-06 53.9 79 39.2
FvH4_6g35121 Fragaria vesca HOM05D000254 ORTHO05D000165 7.4e-06 53.9 70 42.9
Manes.08G061350 Manihot esculenta HOM05D000254 ORTHO05D000165 7.4e-06 53.9 82 39.0
Oeu053131.1 Olea europaea HOM05D000254 ORTHO05D000165 7.4e-06 53.9 81 39.5
TWI36G1440 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 7.4e-06 53.9 77 41.6
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.7e-06 53.5 81 37.0
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.7e-06 53.5 81 37.0
Glyma.01G024100 Glycine max HOM05D000254 ORTHO05D000165 9.7e-06 53.5 87 44.8
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 9.7e-06 53.5 81 37.0
Oeu007637.1 Olea europaea HOM05D000254 ORTHO05D000165 9.7e-06 53.5 75 41.3
Oeu007643.1 Olea europaea HOM05D000254 ORTHO05D000165 9.7e-06 53.5 76 42.1


User provided reference genes

Program Settings