Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G935 Trifolium pratense HOM05D008283 ORTHO05D009928 2.1e-40 168.7 91 100.0
Ca_17166_v3 Cicer arietinum L. HOM05D008283 ORTHO05D009928 1.8e-36 155.6 91 93.4
Ca_30751_v3 Cicer arietinum L. HOM05D008283 ORTHO05D009928 1.8e-36 155.6 91 93.4
Psat1g008520 Pisum sativum HOM05D008283 ORTHO05D009928 2.2e-18 95.5 89 66.3
arahy.Tifrunner.gnm1.ann1.31RDDR Arachis hypogaea HOM05D008283 ORTHO05D009928 8.8e-15 83.6 88 51.1
arahy.Tifrunner.gnm1.ann1.UF4NHZ Arachis hypogaea HOM05D008283 ORTHO05D009928 8.8e-15 83.6 88 51.1
arahy.Tifrunner.gnm1.ann1.X4VFKB Arachis hypogaea HOM05D008283 ORTHO05D009928 8.8e-15 83.6 88 51.1
Lj5g0014228 Lotus japonicus HOM05D008283 ORTHO05D009928 3.1e-12 75.1 81 49.4
LjContig00439g0010892 Lotus japonicus HOM05D008283 ORTHO05D009928 3.1e-12 75.1 81 49.4
Nitab4.5_0004681g0020 Nicotiana tabacum HOM05D008283 ORTHO05D009928 1.3e-10 69.7 75 50.7
RcHm_v2.0_MTg0498941 Rosa chinensis HOM05D008283 ORTHO05D009928 2.2e-10 68.9 74 55.4
Lalb_Chr00c29g0407761 Lupinus albus HOM05D008283 ORTHO05D009928 6.5e-10 67.4 81 45.7
Lalb_Chr00c29g0408321 Lupinus albus HOM05D008283 ORTHO05D009928 6.5e-10 67.4 81 45.7
Nn1g10067 Nelumbo nucifera HOM05D008283 ORTHO05D009928 6.5e-10 67.4 72 50.0
Nitab4.5_0001788g0210 Nicotiana tabacum HOM05D008283 ORTHO05D009928 8.5e-10 67.0 78 47.4
Nitab4.5_0002418g0110 Nicotiana tabacum HOM05D008283 ORTHO05D009928 8.5e-10 67.0 74 48.6
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 1.1e-09 66.6 87 48.3
Nitab4.5_0002426g0010 Nicotiana tabacum HOM05D004133 ORTHO05D004683 1.4e-09 66.2 69 47.8
HanXRQChr15g0485981 Helianthus annuus HOM05D008283 ORTHO05D009928 1.9e-09 65.9 72 50.0
PGSC0003DMG400017853 Solanum tuberosum HOM05D008283 ORTHO05D009928 7.2e-09 63.9 76 48.7
Medtr1g041535 Medicago truncatula HOM05D008283 ORTHO05D009928 9.4e-09 63.5 75 46.7
Gohir.A11G200616 Gossypium hirsutum HOM05D008283 ORTHO05D009928 1.2e-08 63.2 66 50.0
Nitab4.5_0000664g0220 Nicotiana tabacum HOM05D008283 ORTHO05D009928 1.2e-08 63.2 74 48.6
HanXRQChr03g0069121 Helianthus annuus HOM05D008283 ORTHO05D009928 1.6e-08 62.8 72 48.6
BcaC05g26890 Brassica carinata HOM05D008283 ORTHO05D009928 2.1e-08 62.4 75 50.7
BolSC28t60335H Brassica oleracea HOM05D008283 ORTHO05D009928 2.1e-08 62.4 75 50.7
BolSC28t60401H Brassica oleracea HOM05D008283 ORTHO05D009928 2.1e-08 62.4 75 50.7
BraSC77t46668Z Brassica rapa HOM05D008283 ORTHO05D009928 2.1e-08 62.4 75 50.7
HanXRQChr04g0098351 Helianthus annuus HOM05D008283 ORTHO05D009928 2.1e-08 62.4 72 48.6
HanXRQChr17g0561471 Helianthus annuus HOM05D008283 ORTHO05D009928 2.1e-08 62.4 72 48.6
HanXRQMTg0579231 Helianthus annuus HOM05D008283 ORTHO05D009928 2.1e-08 62.4 72 48.6
HanXRQMTg0579701 Helianthus annuus HOM05D008283 ORTHO05D009928 2.1e-08 62.4 72 48.6
BraSC48t46259Z Brassica rapa HOM05D008283 ORTHO05D009928 6.1e-08 60.8 75 49.3
unitig_87.g27963 Utricularia gibba HOM05D008283 ORTHO05D009928 3.9e-07 58.2 86 38.4
Nitab4.5_0000362g0080 Nicotiana tabacum HOM05D008283 ORTHO05D009928 6.7e-07 57.4 65 50.8
RcHm_v2.0_Chr3g0453191 Rosa chinensis HOM05D008283 ORTHO05D009928 8.8e-07 57.0 70 42.9
PGR028G0007 Punica granatum HOM05D008283 ORTHO05D009928 2.0e-06 55.8 69 43.5
Ah.10g028250 Amaranthus hybridus HOM05D008283 ORTHO05D009928 4.4e-06 54.7 80 40.0
Ah.10g028800 Amaranthus hybridus HOM05D008283 ORTHO05D009928 4.4e-06 54.7 80 40.0
AUR62042329 Chenopodium quinoa HOM05D008283 ORTHO05D009928 4.4e-06 54.7 80 40.0
Nitab4.5_0000280g0170 Nicotiana tabacum HOM05D008283 ORTHO05D009928 9.7e-06 53.5 67 40.3


User provided reference genes

Program Settings